RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 USP48Q86UV5 1035 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 C8orf37Q96NL8 207 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.8□□□□□ -0.68
HPS4-217ENST00000496385 NRKQ7Z2Y5 1582 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 ERICH4A6NGS2 130 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 GSPT1P15170 499 aaKnown RBP10.8□□□□□ -0.68
HPS4-217ENST00000496385 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 TMX3Q96JJ7 454 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 CCDC171Q6TFL3 1326 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
HPS4-217ENST00000496385 FYB1O15117 783 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 ZNF622Q969S3 477 aaKnown RBP eCLIP10.79□□□□□ -0.688e-7■□□□□ 8.8
HPS4-217ENST00000496385 ARHGEF10O15013 1369 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 KIF24Q5T7B8 1368 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 PSEN1P49768 467 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 RBM6P78332 1123 aaKnown RBP10.79□□□□□ -0.68
HPS4-217ENST00000496385 MORC1Q86VD1 984 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 MPNDQ8N594 471 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 IL17RAQ96F46 866 aa10.79□□□□□ -0.68
HPS4-217ENST00000496385 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
HPS4-217ENST00000496385 MED1Q15648 1581 aaPredicted RBP10.79□□□□□ -0.68
HPS4-217ENST00000496385 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
HPS4-217ENST00000496385 NEMFO60524 1076 aa10.78□□□□□ -0.68
HPS4-217ENST00000496385 ANAPC15P60006 121 aa10.78□□□□□ -0.68
HPS4-217ENST00000496385 TPM4P67936 248 aa10.78□□□□□ -0.68
HPS4-217ENST00000496385 BCCIPQ9P287 314 aaKnown RBP eCLIP10.78□□□□□ -0.68
HPS4-217ENST00000496385 V9GYY5 206 aaPredicted RBP10.78□□□□□ -0.68
HPS4-217ENST00000496385 ATP8B1O43520 1251 aa10.77□□□□□ -0.68
HPS4-217ENST00000496385 GPS2Q13227 327 aa10.77□□□□□ -0.68
HPS4-217ENST00000496385 CEP135Q66GS9 1140 aa10.77□□□□□ -0.68
HPS4-217ENST00000496385 RSPH14Q9UHP6 348 aa10.77□□□□□ -0.68
HPS4-217ENST00000496385 ATP6V1DQ9Y5K8 247 aa10.77□□□□□ -0.68
HPS4-217ENST00000496385 RTL1A6NKG5 1358 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 TTC21AQ8NDW8 1320 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 ERC2O15083 957 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 GADD45BO75293 160 aaPredicted RBP10.77□□□□□ -0.69
HPS4-217ENST00000496385 GCP02774 474 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.69
HPS4-217ENST00000496385 ICE2Q659A1 982 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 MYCBPQ99417 103 aaPredicted RBP10.77□□□□□ -0.69
HPS4-217ENST00000496385 HDAC5Q9UQL6 1122 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 DHX16O60231 1041 aaKnown RBP10.77□□□□□ -0.69
HPS4-217ENST00000496385 CASQ1P31415 396 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 TPRNQ4KMQ1 711 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 GOLGA6L1Q8N7Z2 621 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 NCAPGQ9BPX3 1015 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 IFT57Q9NWB7 429 aa10.77□□□□□ -0.69
HPS4-217ENST00000496385 RPAP1Q9BWH6 1393 aaPredicted RBP10.76□□□□□ -0.69
HPS4-217ENST00000496385 SPATA31A6Q5VVP1 1343 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 COG3Q96JB2 828 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 C16orf45Q96MC5 204 aaPredicted RBP10.76□□□□□ -0.69
HPS4-217ENST00000496385 KCND1Q9NSA2 647 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 KIAA0232Q92628 1395 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
HPS4-217ENST00000496385 TUBB4AP04350 444 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 RRS1Q15050 365 aaKnown RBP10.76□□□□□ -0.69
HPS4-217ENST00000496385 TPD52L1Q16890 204 aaPredicted RBP10.76□□□□□ -0.69
HPS4-217ENST00000496385 FBXO38Q6PIJ6 1188 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 AEBP1Q8IUX7 1158 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 FAM200AQ8TCP9 573 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 TSR2Q969E8 191 aaKnown RBP10.76□□□□□ -0.69
HPS4-217ENST00000496385 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 PRDM11Q9NQV5 511 aa10.76□□□□□ -0.69
HPS4-217ENST00000496385 NSD2O96028 1365 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 ABCA3Q99758 1704 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 MARF1Q9Y4F3 1742 aaKnown RBP10.75□□□□□ -0.69
HPS4-217ENST00000496385 FAM83GA6ND36 823 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 SLU7O95391 586 aaKnown RBP10.75□□□□□ -0.69
HPS4-217ENST00000496385 H2AFXP16104 143 aaPredicted RBP10.75□□□□□ -0.69
HPS4-217ENST00000496385 PTGS1P23219 599 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 ELP1O95163 1332 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 AP5Z1O43299 807 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 MCCP23508 829 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 CDC25BP30305 580 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 NEK4P51957 841 aa10.75□□□□□ -0.69
HPS4-217ENST00000496385 COL22A1Q8NFW1 1626 aaPredicted RBP10.74□□□□□ -0.69
HPS4-217ENST00000496385 GUCY2CP25092 1073 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 MAPK8IP2Q13387 824 aaPredicted RBP10.74□□□□□ -0.69
HPS4-217ENST00000496385 ZSCAN25Q6NSZ9 544 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 CERS3Q8IU89 383 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 CHAMP1Q96JM3 812 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 PHRF1Q9P1Y6 1649 aaKnown RBP10.74□□□□□ -0.69
HPS4-217ENST00000496385 RGS12O14924 1447 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 NOM1Q5C9Z4 860 aaKnown RBP10.74□□□□□ -0.69
HPS4-217ENST00000496385 CCDC186Q7Z3E2 898 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 SPC24Q8NBT2 197 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 ZNF215Q9UL58 517 aaPredicted RBP10.74□□□□□ -0.69
HPS4-217ENST00000496385 KIF20BQ96Q89 1820 aa10.74□□□□□ -0.69
HPS4-217ENST00000496385 PTPRCP08575 1304 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
HPS4-217ENST00000496385 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 SIRT2Q8IXJ6 389 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 CRYBG1Q9Y4K1 1723 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 OVOS2A0A0J9YW53 1432 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 OVOS2Q6IE36 1432 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 CAVIN2O95810 425 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms