RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
PTPN7-218ENST00000496197 COL24A1Q17RW2 1714 aa17.28■□□□□ 0.36
PTPN7-218ENST00000496197 ADRA2BP18089 450 aa17.27■□□□□ 0.36
PTPN7-218ENST00000496197 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
PTPN7-218ENST00000496197 HLFQ16534 295 aa17.27■□□□□ 0.36
PTPN7-218ENST00000496197 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
PTPN7-218ENST00000496197 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
PTPN7-218ENST00000496197 ARXQ96QS3 562 aa17.26■□□□□ 0.35
PTPN7-218ENST00000496197 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
PTPN7-218ENST00000496197 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
PTPN7-218ENST00000496197 F6X3S4 739 aa17.25■□□□□ 0.35
PTPN7-218ENST00000496197 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
PTPN7-218ENST00000496197 NARFQ9UHQ1 456 aa17.25■□□□□ 0.35
PTPN7-218ENST00000496197 PI4KAP2A4QPH2 592 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 RFC4P35249 363 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-218ENST00000496197 PI4KAP1Q8N8J0 262 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-218ENST00000496197 A0A087WZG4 1122 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 MSH5O43196 834 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 PLIN1O60240 522 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 GYS1P13807 737 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 ANKRD13DQ6ZTN6 518 aa17.24■□□□□ 0.35
PTPN7-218ENST00000496197 FKBP8Q14318 412 aa17.23■□□□□ 0.35
PTPN7-218ENST00000496197 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
PTPN7-218ENST00000496197 PLBD2Q8NHP8 589 aa17.23■□□□□ 0.35
PTPN7-218ENST00000496197 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
PTPN7-218ENST00000496197 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
PTPN7-218ENST00000496197 TRIM27P14373 513 aa17.22■□□□□ 0.35
PTPN7-218ENST00000496197 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
PTPN7-218ENST00000496197 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
PTPN7-218ENST00000496197 FLAD1Q8NFF5 587 aa17.22■□□□□ 0.35
PTPN7-218ENST00000496197 PTPRCP08575 1304 aa17.22■□□□□ 0.35
PTPN7-218ENST00000496197 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
PTPN7-218ENST00000496197 ZPR1O75312 459 aa17.21■□□□□ 0.35
PTPN7-218ENST00000496197 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
PTPN7-218ENST00000496197 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
PTPN7-218ENST00000496197 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
PTPN7-218ENST00000496197 RIC3Q7Z5B4 369 aa17.21■□□□□ 0.35
PTPN7-218ENST00000496197 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
PTPN7-218ENST00000496197 ATP10DQ9P241 1426 aa17.2■□□□□ 0.34
PTPN7-218ENST00000496197 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
PTPN7-218ENST00000496197 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
PTPN7-218ENST00000496197 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
PTPN7-218ENST00000496197 RLBP1P12271 317 aa17.19■□□□□ 0.34
PTPN7-218ENST00000496197 ATF7IPQ6VMQ6 1270 aa17.19■□□□□ 0.34
PTPN7-218ENST00000496197 DNAAF4Q8WXU2 420 aa17.19■□□□□ 0.34
PTPN7-218ENST00000496197 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
PTPN7-218ENST00000496197 MYD88Q99836 296 aa17.19■□□□□ 0.34
PTPN7-218ENST00000496197 ABCC4O15439 1325 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 ATP5J2-PTCD1G3V325 749 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 C20orf194Q5TEA3 1177 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 ZKSCAN2Q63HK3 967 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 METTL22Q9BUU2 404 aaPredicted RBP17.18■□□□□ 0.34
PTPN7-218ENST00000496197 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 GPTP24298 496 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 RRP1P56182 461 aaKnown RBP17.18■□□□□ 0.34
PTPN7-218ENST00000496197 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 CWF19L2Q2TBE0 894 aaKnown RBP17.18■□□□□ 0.34
PTPN7-218ENST00000496197 BICDL1Q6ZP65 573 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
PTPN7-218ENST00000496197 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
PTPN7-218ENST00000496197 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
PTPN7-218ENST00000496197 NFIXQ14938 502 aa17.17■□□□□ 0.34
PTPN7-218ENST00000496197 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
PTPN7-218ENST00000496197 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
PTPN7-218ENST00000496197 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
PTPN7-218ENST00000496197 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
PTPN7-218ENST00000496197 TM4SF1P30408 202 aa17.16■□□□□ 0.34
PTPN7-218ENST00000496197 DDR1Q08345 913 aa17.16■□□□□ 0.34
PTPN7-218ENST00000496197 API5Q9BZZ5 524 aaKnown RBP17.16■□□□□ 0.34
PTPN7-218ENST00000496197 ANKRD31Q8N7Z5 1873 aa17.15■□□□□ 0.34
PTPN7-218ENST00000496197 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
PTPN7-218ENST00000496197 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTPN7-218ENST00000496197 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
PTPN7-218ENST00000496197 LAMB2P55268 1798 aa17.15■□□□□ 0.34
PTPN7-218ENST00000496197 TNRC6CQ9HCJ0 1690 aaKnown RBP17.15■□□□□ 0.34
PTPN7-218ENST00000496197 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
PTPN7-218ENST00000496197 RGL2O15211 777 aa17.14■□□□□ 0.33
PTPN7-218ENST00000496197 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
PTPN7-218ENST00000496197 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
PTPN7-218ENST00000496197 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
PTPN7-218ENST00000496197 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
PTPN7-218ENST00000496197 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.33
PTPN7-218ENST00000496197 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
PTPN7-218ENST00000496197 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
PTPN7-218ENST00000496197 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-218ENST00000496197 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
PTPN7-218ENST00000496197 MMP10P09238 476 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
PTPN7-218ENST00000496197 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 LINS1Q8NG48 757 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 NTSR2O95665 410 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 HSP90AB3PQ58FF7 597 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms