RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 WWC1Q8IX03 1113 aa10.29□□□□□ -0.76
CLTC-208ENST00000496076 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
CLTC-208ENST00000496076 SPATA31C1P0DKV0 1188 aa10.28□□□□□ -0.76
CLTC-208ENST00000496076 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
CLTC-208ENST00000496076 SIN3BO75182 1162 aa10.27□□□□□ -0.77
CLTC-208ENST00000496076 GATA4P43694 442 aa10.27□□□□□ -0.77
CLTC-208ENST00000496076 SFSWAPQ12872 951 aaKnown RBP10.27□□□□□ -0.77
CLTC-208ENST00000496076 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
CLTC-208ENST00000496076 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
CLTC-208ENST00000496076 MDFIQ99750 246 aa10.27□□□□□ -0.77
CLTC-208ENST00000496076 GPC6Q9Y625 555 aaPredicted RBP10.27□□□□□ -0.77
CLTC-208ENST00000496076 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
CLTC-208ENST00000496076 SEMA6BQ9H3T3 888 aa10.26□□□□□ -0.77
CLTC-208ENST00000496076 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
CLTC-208ENST00000496076 TPCN2Q8NHX9 752 aa10.25□□□□□ -0.77
CLTC-208ENST00000496076 SLC30A3Q99726 388 aa10.25□□□□□ -0.77
CLTC-208ENST00000496076 SPDYE3A6NKU9 549 aa10.24□□□□□ -0.77
CLTC-208ENST00000496076 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
CLTC-208ENST00000496076 ITGB7P26010 798 aa10.24□□□□□ -0.77
CLTC-208ENST00000496076 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
CLTC-208ENST00000496076 PRRT3Q5FWE3 981 aa10.23□□□□□ -0.77
CLTC-208ENST00000496076 KIAA1024Q9UPX6 916 aa10.23□□□□□ -0.77
CLTC-208ENST00000496076 HCN4Q9Y3Q4 1203 aa10.23□□□□□ -0.77
CLTC-208ENST00000496076 M0R082 166 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 RAD21O60216 631 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 ZNF417Q8TAU3 575 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 ZNF587Q96SQ5 575 aaPredicted RBP10.22□□□□□ -0.77
CLTC-208ENST00000496076 STARD13Q9Y3M8 1113 aa10.22□□□□□ -0.77
CLTC-208ENST00000496076 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
CLTC-208ENST00000496076 CLDN10P78369 228 aa10.21□□□□□ -0.77
CLTC-208ENST00000496076 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
CLTC-208ENST00000496076 CEP63Q96MT8 703 aa10.21□□□□□ -0.77
CLTC-208ENST00000496076 TSPAN10Q9H1Z9 355 aaPredicted RBP10.21□□□□□ -0.77
CLTC-208ENST00000496076 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 POM121CA8CG34 1229 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 PSMA6P60900 246 aaKnown RBP10.2□□□□□ -0.78
CLTC-208ENST00000496076 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 COL9A3Q14050 684 aaPredicted RBP10.2□□□□□ -0.78
CLTC-208ENST00000496076 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 RAB44Q7Z6P3 723 aaPredicted RBP10.2□□□□□ -0.78
CLTC-208ENST00000496076 PLEKHM2Q8IWE5 1019 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 MICALL1Q8N3F8 863 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 ADAMTS19Q8TE59 1207 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 HSH2DQ96JZ2 352 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 ANKIB1Q9P2G1 1089 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 CHMP3Q9Y3E7 222 aa10.2□□□□□ -0.78
CLTC-208ENST00000496076 SFI1A8K8P3 1242 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 APBA3O96018 575 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 ALBP02768 609 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 C8orf86Q6ZUL3 223 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 PHACTR1Q9C0D0 580 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 BRD7Q9NPI1 651 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 PRDM6Q9NQX0 595 aa10.19□□□□□ -0.78
CLTC-208ENST00000496076 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
CLTC-208ENST00000496076 ADH7P40394 386 aa10.18□□□□□ -0.78
CLTC-208ENST00000496076 TRIM28Q13263 835 aaKnown RBP10.18□□□□□ -0.78
CLTC-208ENST00000496076 HDGFL1Q5TGJ6 251 aa10.18□□□□□ -0.78
CLTC-208ENST00000496076 OGFOD1Q8N543 542 aa10.18□□□□□ -0.78
CLTC-208ENST00000496076 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
CLTC-208ENST00000496076 LARGE2Q8N3Y3 721 aa10.17□□□□□ -0.78
CLTC-208ENST00000496076 ZNF280CQ8ND82 737 aa10.17□□□□□ -0.78
CLTC-208ENST00000496076 KCNH4Q9UQ05 1017 aa10.17□□□□□ -0.78
CLTC-208ENST00000496076 KCNQ4P56696 695 aa10.16□□□□□ -0.78
CLTC-208ENST00000496076 RSPO4Q2I0M5 234 aaPredicted RBP10.16□□□□□ -0.78
CLTC-208ENST00000496076 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
CLTC-208ENST00000496076 SUSD3Q96L08 255 aa10.16□□□□□ -0.78
CLTC-208ENST00000496076 UCN2Q96RP3 112 aa10.16□□□□□ -0.78
CLTC-208ENST00000496076 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
CLTC-208ENST00000496076 PALM3A6NDB9 673 aaPredicted RBP10.15□□□□□ -0.78
CLTC-208ENST00000496076 M0R2N6 131 aa10.15□□□□□ -0.78
CLTC-208ENST00000496076 ATP9BO43861 1147 aa10.15□□□□□ -0.78
CLTC-208ENST00000496076 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
CLTC-208ENST00000496076 PPP1R12BO60237 982 aaPredicted RBP10.14□□□□□ -0.79
CLTC-208ENST00000496076 NID1P14543 1247 aa10.14□□□□□ -0.79
CLTC-208ENST00000496076 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
CLTC-208ENST00000496076 TYRO3Q06418 890 aa10.14□□□□□ -0.79
CLTC-208ENST00000496076 GRIK4Q16099 956 aa10.14□□□□□ -0.79
CLTC-208ENST00000496076 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
CLTC-208ENST00000496076 ZMYM1Q5SVZ6 1142 aa10.14□□□□□ -0.79
CLTC-208ENST00000496076 C20orf204Q6ZNR8 217 aa10.14□□□□□ -0.79
CLTC-208ENST00000496076 TSEN2Q8NCE0 465 aaKnown RBP10.14□□□□□ -0.79
CLTC-208ENST00000496076 BHMTQ93088 406 aa10.13□□□□□ -0.79
CLTC-208ENST00000496076 ZNF594Q96JF6 807 aaPredicted RBP10.13□□□□□ -0.79
CLTC-208ENST00000496076 NACC1Q96RE7 527 aa10.13□□□□□ -0.79
CLTC-208ENST00000496076 C21orf2O43822 256 aa10.12□□□□□ -0.79
CLTC-208ENST00000496076 ALDH16A1Q8IZ83 802 aa10.12□□□□□ -0.79
CLTC-208ENST00000496076 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
CLTC-208ENST00000496076 FLIIQ13045 1269 aa10.11□□□□□ -0.79
CLTC-208ENST00000496076 TRAPPC3LQ5T215 181 aa10.11□□□□□ -0.79
CLTC-208ENST00000496076 SIX5Q8N196 739 aa10.11□□□□□ -0.79
CLTC-208ENST00000496076 ATAD2Q6PL18 1390 aa10.11□□□□□ -0.79
CLTC-208ENST00000496076 LILRB5O75023 590 aa10.1□□□□□ -0.79
CLTC-208ENST00000496076 DKK1O94907 266 aa10.1□□□□□ -0.79
CLTC-208ENST00000496076 TBC1D8BQ0IIM8 1120 aa10.1□□□□□ -0.79
CLTC-208ENST00000496076 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms