RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 NPM2Q86SE8 214 aaKnown RBP30.51■■■□□ 2.47
PPP1R3F-205ENST00000495799 MYD88Q99836 296 aa30.51■■■□□ 2.47
PPP1R3F-205ENST00000495799 C9orf78Q9NZ63 289 aaPredicted RBP30.51■■■□□ 2.47
PPP1R3F-205ENST00000495799 BRWD3Q6RI45 1802 aa30.5■■■□□ 2.47
PPP1R3F-205ENST00000495799 KRT27Q7Z3Y8 459 aa30.49■■■□□ 2.47
PPP1R3F-205ENST00000495799 RREB1Q92766 1687 aa30.49■■■□□ 2.47
PPP1R3F-205ENST00000495799 AFDNP55196 1824 aaKnown RBP30.48■■■□□ 2.47
PPP1R3F-205ENST00000495799 IL6STP40189 918 aaPredicted RBP30.48■■■□□ 2.47
PPP1R3F-205ENST00000495799 SIRT2Q8IXJ6 389 aa30.48■■■□□ 2.47
PPP1R3F-205ENST00000495799 FAM196AQ6ZSG2 479 aa30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 TTLL7Q6ZT98 887 aa30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 COL5A3P25940 1745 aaPredicted RBP30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 NEURL1BA8MQ27 555 aa30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 CWF19L2Q2TBE0 894 aaKnown RBP30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 CCDC87Q9NVE4 849 aa30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 LRRFIP2Q9Y608 721 aaKnown RBP30.47■■■□□ 2.47
PPP1R3F-205ENST00000495799 UTYO14607 1347 aa30.46■■■□□ 2.47
PPP1R3F-205ENST00000495799 GRM8O00222 908 aa30.46■■■□□ 2.47
PPP1R3F-205ENST00000495799 IGKV5-2P06315 115 aa30.46■■■□□ 2.47
PPP1R3F-205ENST00000495799 FAM182BQ5T319 152 aa30.45■■■□□ 2.47
PPP1R3F-205ENST00000495799 PDZRN3Q9UPQ7 1066 aa30.45■■■□□ 2.47
PPP1R3F-205ENST00000495799 ZBTB1Q9Y2K1 713 aa30.45■■■□□ 2.47
PPP1R3F-205ENST00000495799 ZNF330Q9Y3S2 320 aaPredicted RBP30.45■■■□□ 2.47
PPP1R3F-205ENST00000495799 BCL11BQ9C0K0 894 aaPredicted RBP30.44■■■□□ 2.46
PPP1R3F-205ENST00000495799 NBPF7P0C2Y1 421 aaPredicted RBP30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 RXRBP28702 533 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 CRKLP46109 303 aaKnown RBP30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 ATP8B2P98198 1209 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 ITPK1Q13572 414 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 GCKRQ14397 625 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 DCTPP1Q9H773 170 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 LY75O60449 1722 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 ZBTB3Q9H5J0 574 aa30.42■■■□□ 2.46
PPP1R3F-205ENST00000495799 MAP3K15Q6ZN16 1313 aa30.41■■■□□ 2.46
PPP1R3F-205ENST00000495799 HSP90AB3PQ58FF7 597 aa30.4■■■□□ 2.46
PPP1R3F-205ENST00000495799 INTS5Q6P9B9 1019 aaKnown RBP30.4■■■□□ 2.46
PPP1R3F-205ENST00000495799 NUCB1Q02818 461 aa30.39■■■□□ 2.46
PPP1R3F-205ENST00000495799 CCDC191Q8NCU4 936 aa30.38■■■□□ 2.45
PPP1R3F-205ENST00000495799 CWC25Q9NXE8 425 aaPredicted RBP30.38■■■□□ 2.45
PPP1R3F-205ENST00000495799 ZBTB47Q9UFB7 747 aaPredicted RBP30.38■■■□□ 2.45
PPP1R3F-205ENST00000495799 ERVV-1B6SEH8 477 aa30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 RGS3P49796 1198 aa30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 EIF5P55010 431 aaKnown RBP30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 CNTNAP4Q9C0A0 1308 aa30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 TCIRG1Q13488 830 aa30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 PTF1AQ7RTS3 328 aa30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 ARXQ96QS3 562 aa30.37■■■□□ 2.45
PPP1R3F-205ENST00000495799 COL15A1P39059 1388 aa30.36■■■□□ 2.45
PPP1R3F-205ENST00000495799 ATP5J2-PTCD1G3V325 749 aa30.36■■■□□ 2.45
PPP1R3F-205ENST00000495799 DZIP3Q86Y13 1208 aaKnown RBP30.36■■■□□ 2.45
PPP1R3F-205ENST00000495799 ANKRD36CQ5JPF3 1778 aa30.35■■■□□ 2.45
PPP1R3F-205ENST00000495799 GIGYF2Q6Y7W6 1299 aaKnown RBP30.35■■■□□ 2.45
PPP1R3F-205ENST00000495799 CHD1LQ86WJ1 897 aa30.35■■■□□ 2.45
PPP1R3F-205ENST00000495799 CCNL1Q9UK58 526 aaPredicted RBP30.35■■■□□ 2.45
PPP1R3F-205ENST00000495799 A0A087WZG4 1122 aa30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 TRIM28Q13263 835 aaKnown RBP30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 MTX1Q13505 466 aa30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 RC3H1Q5TC82 1133 aaKnown RBP30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 ANKRD45Q5TZF3 282 aa30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 SSH3Q8TE77 659 aa30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 ISCA1Q9BUE6 129 aa30.34■■■□□ 2.45
PPP1R3F-205ENST00000495799 MYH14Q7Z406 1995 aaKnown RBP30.33■■■□□ 2.45
PPP1R3F-205ENST00000495799 HMGB2P26583 209 aaKnown RBP30.33■■■□□ 2.45
PPP1R3F-205ENST00000495799 LINC00116Q8NCU8 138 aa30.33■■■□□ 2.45
PPP1R3F-205ENST00000495799 PNMA6EA0A0J9YXQ4 647 aa30.32■■■□□ 2.44
PPP1R3F-205ENST00000495799 PPP1R42Q7Z4L9 355 aa30.32■■■□□ 2.44
PPP1R3F-205ENST00000495799 SKAP1Q86WV1 359 aa30.32■■■□□ 2.44
PPP1R3F-205ENST00000495799 POLA2Q14181 598 aa30.32■■■□□ 2.44
PPP1R3F-205ENST00000495799 SUCLG2Q96I99 432 aa30.32■■■□□ 2.44
PPP1R3F-205ENST00000495799 SRGAP3O43295 1099 aa30.31■■■□□ 2.44
PPP1R3F-205ENST00000495799 NUP98P52948 1817 aa30.3■■■□□ 2.44
PPP1R3F-205ENST00000495799 TAF1LQ8IZX4 1826 aa30.3■■■□□ 2.44
PPP1R3F-205ENST00000495799 H7C1W4 665 aa30.28■■■□□ 2.44
PPP1R3F-205ENST00000495799 UBE3BQ7Z3V4 1068 aa30.28■■■□□ 2.44
PPP1R3F-205ENST00000495799 LNPKQ9C0E8 428 aa30.28■■■□□ 2.44
PPP1R3F-205ENST00000495799 HSP90AB4PQ58FF6 505 aa30.27■■■□□ 2.44
PPP1R3F-205ENST00000495799 TBC1D2BQ9UPU7 963 aa30.27■■■□□ 2.44
PPP1R3F-205ENST00000495799 BICC1Q9H694 974 aaKnown RBP30.27■■■□□ 2.44
PPP1R3F-205ENST00000495799 TRIM37O94972 964 aa30.26■■■□□ 2.43
PPP1R3F-205ENST00000495799 CASP7P55210 303 aa30.26■■■□□ 2.43
PPP1R3F-205ENST00000495799 BCORQ6W2J9 1755 aa30.26■■■□□ 2.43
PPP1R3F-205ENST00000495799 RGL2O15211 777 aa30.25■■■□□ 2.43
PPP1R3F-205ENST00000495799 RAB11FIP3O75154 756 aa30.25■■■□□ 2.43
PPP1R3F-205ENST00000495799 HLFQ16534 295 aa30.25■■■□□ 2.43
PPP1R3F-205ENST00000495799 SLC27A3Q5K4L6 730 aa30.25■■■□□ 2.43
PPP1R3F-205ENST00000495799 RGS17Q9UGC6 210 aaPredicted RBP30.25■■■□□ 2.43
PPP1R3F-205ENST00000495799 ZNF652Q9Y2D9 606 aa30.25■■■□□ 2.43
PPP1R3F-205ENST00000495799 KAZALD1Q96I82 304 aa30.24■■■□□ 2.43
PPP1R3F-205ENST00000495799 RPS6KA4O75676 772 aa30.23■■■□□ 2.43
PPP1R3F-205ENST00000495799 PDE4AP27815 886 aa30.23■■■□□ 2.43
PPP1R3F-205ENST00000495799 C4BP0C0L5 1744 aa30.23■■■□□ 2.43
PPP1R3F-205ENST00000495799 CAMTA2O94983 1202 aa30.22■■■□□ 2.43
PPP1R3F-205ENST00000495799 PCCAP05165 728 aaPredicted RBP30.22■■■□□ 2.43
PPP1R3F-205ENST00000495799 EXOC6BQ9Y2D4 811 aa30.22■■■□□ 2.43
PPP1R3F-205ENST00000495799 LRRCC1Q9C099 1032 aa30.22■■■□□ 2.43
PPP1R3F-205ENST00000495799 SURF6O75683 361 aaKnown RBP30.21■■■□□ 2.43
PPP1R3F-205ENST00000495799 KCNQ4P56696 695 aa30.21■■■□□ 2.43
PPP1R3F-205ENST00000495799 RABL6Q3YEC7 729 aaPredicted RBP30.21■■■□□ 2.43
PPP1R3F-205ENST00000495799 POTEAQ6S8J7 498 aa30.21■■■□□ 2.43
PPP1R3F-205ENST00000495799 NLRP10Q86W26 655 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms