RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.24
ECHDC3-204ENST00000495787 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
ECHDC3-204ENST00000495787 F6X3S4 739 aa13.53□□□□□ -0.24
ECHDC3-204ENST00000495787 PIGBQ92521 554 aa13.53□□□□□ -0.24
ECHDC3-204ENST00000495787 ATP10DQ9P241 1426 aa13.53□□□□□ -0.24
ECHDC3-204ENST00000495787 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
ECHDC3-204ENST00000495787 PRIM1P49642 420 aaKnown RBP13.52□□□□□ -0.25
ECHDC3-204ENST00000495787 KCNQ4P56696 695 aa13.52□□□□□ -0.25
ECHDC3-204ENST00000495787 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
ECHDC3-204ENST00000495787 PDIA6Q15084 440 aa13.52□□□□□ -0.25
ECHDC3-204ENST00000495787 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
ECHDC3-204ENST00000495787 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
ECHDC3-204ENST00000495787 MSH5O43196 834 aa13.51□□□□□ -0.25
ECHDC3-204ENST00000495787 ANXA1P04083 346 aa13.51□□□□□ -0.25
ECHDC3-204ENST00000495787 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
ECHDC3-204ENST00000495787 GPBP1L1Q9HC44 474 aaPredicted RBP13.51□□□□□ -0.25
ECHDC3-204ENST00000495787 CCNL1Q9UK58 526 aaPredicted RBP13.51□□□□□ -0.25
ECHDC3-204ENST00000495787 LY75O60449 1722 aa13.5□□□□□ -0.25
ECHDC3-204ENST00000495787 PROSER3Q2NL68 480 aa13.5□□□□□ -0.25
ECHDC3-204ENST00000495787 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
ECHDC3-204ENST00000495787 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
ECHDC3-204ENST00000495787 ATG3Q9NT62 314 aa13.5□□□□□ -0.25
ECHDC3-204ENST00000495787 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
ECHDC3-204ENST00000495787 HSPA6P17066 643 aa13.49□□□□□ -0.25
ECHDC3-204ENST00000495787 KSR2Q6VAB6 950 aa13.49□□□□□ -0.25
ECHDC3-204ENST00000495787 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
ECHDC3-204ENST00000495787 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
ECHDC3-204ENST00000495787 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
ECHDC3-204ENST00000495787 ADCY9O60503 1353 aa13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 PI4KAP2A4QPH2 592 aa13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 PI4KAP1Q8N8J0 262 aa13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 SRCIN1Q9C0H9 1055 aa13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
ECHDC3-204ENST00000495787 GNAI3P08754 354 aa13.47□□□□□ -0.25
ECHDC3-204ENST00000495787 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
ECHDC3-204ENST00000495787 LRP10Q7Z4F1 713 aa13.47□□□□□ -0.25
ECHDC3-204ENST00000495787 MEIS3Q99687 375 aa13.47□□□□□ -0.25
ECHDC3-204ENST00000495787 MYL6BP14649 208 aa13.46□□□□□ -0.25
ECHDC3-204ENST00000495787 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
ECHDC3-204ENST00000495787 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
ECHDC3-204ENST00000495787 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
ECHDC3-204ENST00000495787 C1orf115Q9H7X2 142 aa13.46□□□□□ -0.25
ECHDC3-204ENST00000495787 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
ECHDC3-204ENST00000495787 ALDH1L1O75891 902 aa13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 SMC5Q8IY18 1101 aa13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
ECHDC3-204ENST00000495787 TJP1Q07157 1748 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 GNAI2P04899 355 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 DNAJC10Q8IXB1 793 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 ZNF526Q8TF50 670 aaPredicted RBP13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 USP44Q9H0E7 712 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
ECHDC3-204ENST00000495787 CICQ96RK0 1608 aaPredicted RBP13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 STARD3NLO95772 234 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 A1BGP04217 495 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 ANKRD13DQ6ZTN6 518 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 LINS1Q8NG48 757 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 GCC1Q96CN9 775 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
ECHDC3-204ENST00000495787 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
ECHDC3-204ENST00000495787 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
ECHDC3-204ENST00000495787 NEXNQ0ZGT2 675 aa13.42□□□□□ -0.26
ECHDC3-204ENST00000495787 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
ECHDC3-204ENST00000495787 METTL22Q9BUU2 404 aaPredicted RBP13.42□□□□□ -0.26
ECHDC3-204ENST00000495787 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
ECHDC3-204ENST00000495787 ZNF831Q5JPB2 1677 aa13.41□□□□□ -0.26
ECHDC3-204ENST00000495787 HMMRO75330 724 aa13.41□□□□□ -0.26
ECHDC3-204ENST00000495787 SLC4A9Q96Q91 983 aa13.41□□□□□ -0.26
ECHDC3-204ENST00000495787 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
ECHDC3-204ENST00000495787 HDAC5Q9UQL6 1122 aa13.41□□□□□ -0.26
ECHDC3-204ENST00000495787 CYP19A1P11511 503 aaPredicted RBP13.4□□□□□ -0.26
ECHDC3-204ENST00000495787 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
ECHDC3-204ENST00000495787 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
ECHDC3-204ENST00000495787 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
ECHDC3-204ENST00000495787 RGS3P49796 1198 aa13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 NUCB1Q02818 461 aa13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 MYD88Q99836 296 aa13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 LRRFIP2Q9Y608 721 aaKnown RBP13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 UTYO14607 1347 aa13.39□□□□□ -0.27
ECHDC3-204ENST00000495787 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 NEURL1BA8MQ27 555 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 KIF3CO14782 793 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 IGKV5-2P06315 115 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 APLP1P51693 650 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms