RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 ADCY9O60503 1353 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 CHD2O14647 1828 aaKnown RBP11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 LTBP4Q8N2S1 1624 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 ZNF445P59923 1031 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 ZSCAN30Q86W11 494 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 IFNL2Q8IZJ0 200 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 SLC52A2Q9HAB3 445 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 NEK4P51957 841 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 KSR2Q6VAB6 950 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 RBSNQ9H1K0 784 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 PALD1Q9ULE6 856 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 LARP1Q6PKG0 1096 aaKnown RBP11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 CWC27Q6UX04 472 aaKnown RBP11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 GPT2Q8TD30 523 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 BICC1Q9H694 974 aaKnown RBP11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 NFAT5O94916 1531 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 KAT6BQ8WYB5 2073 aa11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 MSNP26038 577 aaKnown RBP11.03□□□□□ -0.64
TM9SF4-207ENST00000495749 A1BGP04217 495 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 RGPD2P0DJD1 1756 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 PDIA6Q15084 440 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 EPHA10Q5JZY3 1008 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 KIAA1211Q6ZU35 1233 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 SSH3Q8TE77 659 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 SPATA31A3Q5VYP0 1347 aa11.02□□□□□ -0.65
TM9SF4-207ENST00000495749 IGKV5-2P06315 115 aa11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 MST1RQ04912 1400 aa11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 RRP9O43818 475 aaKnown RBP11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 CPA1P15085 419 aa11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 AACSQ86V21 672 aa11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 NSFL1CQ9UNZ2 370 aaKnown RBP11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 A0A0U1RQG5 324 aaPredicted RBP11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 CHMLP26374 656 aa11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 TMX3Q96JJ7 454 aa11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
TM9SF4-207ENST00000495749 SYCE3A1L190 88 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 GRM8O00222 908 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 BABAM1Q9NWV8 329 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 HYPKQ9NX55 129 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 TLR7Q9NYK1 1049 aaKnown RBP11□□□□□ -0.65
TM9SF4-207ENST00000495749 TMEM63CQ9P1W3 806 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 LTN1O94822 1766 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 IFIT2P09913 472 aaKnown RBP11□□□□□ -0.65
TM9SF4-207ENST00000495749 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 KAZALD1Q96I82 304 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 BOLA2Q9H3K6 86 aa11□□□□□ -0.65
TM9SF4-207ENST00000495749 MEGF6O75095 1541 aa10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 CHGBP05060 677 aa10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 ZCRB1Q8TBF4 217 aaKnown RBP10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 GLIPR1L2Q4G1C9 344 aa10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 CLASRPQ8N2M8 674 aaKnown RBP10.99□□□□□ -0.65
TM9SF4-207ENST00000495749 A0A087WZG4 1122 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 ADAMTS2O95450 1211 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 PDE4CQ08493 712 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 G3BP1Q13283 466 aaKnown RBP eCLIP10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 RNF214Q8ND24 703 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 LINS1Q8NG48 757 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 OFD1O75665 1012 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 TPM2P07951 284 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 FMNL2Q96PY5 1086 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 BTG4Q9NY30 223 aa10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 MARF1Q9Y4F3 1742 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-207ENST00000495749 KDM6AO15550 1401 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 POLA2Q14181 598 aa10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 EAF2Q96CJ1 260 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 NEURL1BA8MQ27 555 aa10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 HOXB7P09629 217 aa10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
TM9SF4-207ENST00000495749 SASH1O94885 1247 aa10.96□□□□□ -0.65
TM9SF4-207ENST00000495749 MCCP23508 829 aa10.96□□□□□ -0.65
TM9SF4-207ENST00000495749 PI4K2BQ8TCG2 481 aa10.96□□□□□ -0.65
TM9SF4-207ENST00000495749 SALL3Q9BXA9 1300 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NUTM2BA6NNL0 878 aaPredicted RBP10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 FAM177BA6PVY3 158 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NUTM2EB1AL46 878 aaPredicted RBP10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NBPF26B4DH59 902 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 GCKRQ14397 625 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NBPF14Q5TI25 921 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NUTM2AQ8IVF1 878 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms