RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
PKP4-215ENST00000494945 PLBD2Q8NHP8 589 aa13.89□□□□□ -0.19
PKP4-215ENST00000494945 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
PKP4-215ENST00000494945 KDM2BQ8NHM5 1336 aa13.89□□□□□ -0.19
PKP4-215ENST00000494945 GNAI3P08754 354 aa13.88□□□□□ -0.19
PKP4-215ENST00000494945 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
PKP4-215ENST00000494945 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
PKP4-215ENST00000494945 POTEAQ6S8J7 498 aa13.88□□□□□ -0.19
PKP4-215ENST00000494945 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
PKP4-215ENST00000494945 PTF1AQ7RTS3 328 aa13.88□□□□□ -0.19
PKP4-215ENST00000494945 LINS1Q8NG48 757 aa13.88□□□□□ -0.19
PKP4-215ENST00000494945 LAMB2P55268 1798 aa13.88□□□□□ -0.19
PKP4-215ENST00000494945 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
PKP4-215ENST00000494945 ITPK1Q13572 414 aa13.87□□□□□ -0.19
PKP4-215ENST00000494945 MEIS3Q99687 375 aa13.87□□□□□ -0.19
PKP4-215ENST00000494945 METTL22Q9BUU2 404 aaPredicted RBP13.87□□□□□ -0.19
PKP4-215ENST00000494945 RWDD1Q9H446 243 aaPredicted RBP13.87□□□□□ -0.19
PKP4-215ENST00000494945 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
PKP4-215ENST00000494945 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
PKP4-215ENST00000494945 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
PKP4-215ENST00000494945 ZBTB1Q9Y2K1 713 aa13.86□□□□□ -0.19
PKP4-215ENST00000494945 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
PKP4-215ENST00000494945 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
PKP4-215ENST00000494945 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
PKP4-215ENST00000494945 TTLL7Q6ZT98 887 aa13.85□□□□□ -0.19
PKP4-215ENST00000494945 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
PKP4-215ENST00000494945 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
PKP4-215ENST00000494945 HDAC5Q9UQL6 1122 aa13.85□□□□□ -0.19
PKP4-215ENST00000494945 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
PKP4-215ENST00000494945 GNAI2P04899 355 aa13.84□□□□□ -0.19
PKP4-215ENST00000494945 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
PKP4-215ENST00000494945 EIF5P55010 431 aaKnown RBP13.84□□□□□ -0.19
PKP4-215ENST00000494945 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
PKP4-215ENST00000494945 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
PKP4-215ENST00000494945 MYD88Q99836 296 aa13.84□□□□□ -0.19
PKP4-215ENST00000494945 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
PKP4-215ENST00000494945 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
PKP4-215ENST00000494945 MAP3K15Q6ZN16 1313 aa13.84□□□□□ -0.19
PKP4-215ENST00000494945 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 TRIM37O94972 964 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 IGHDP01880 384 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 IGKV5-2P06315 115 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
PKP4-215ENST00000494945 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
PKP4-215ENST00000494945 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 UTYO14607 1347 aa13.83□□□□□ -0.2
PKP4-215ENST00000494945 ERVV-1B6SEH8 477 aa13.82□□□□□ -0.2
PKP4-215ENST00000494945 CWF19L2Q2TBE0 894 aaKnown RBP13.82□□□□□ -0.2
PKP4-215ENST00000494945 SLC27A3Q5K4L6 730 aa13.82□□□□□ -0.2
PKP4-215ENST00000494945 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
PKP4-215ENST00000494945 ZBTB3Q9H5J0 574 aa13.82□□□□□ -0.2
PKP4-215ENST00000494945 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
PKP4-215ENST00000494945 ZNF330Q9Y3S2 320 aaPredicted RBP13.82□□□□□ -0.2
PKP4-215ENST00000494945 EP400Q96L91 3159 aa13.82□□□□□ -0.2
PKP4-215ENST00000494945 COL15A1P39059 1388 aa13.82□□□□□ -0.2
PKP4-215ENST00000494945 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
PKP4-215ENST00000494945 A0A087WZG4 1122 aa13.81□□□□□ -0.2
PKP4-215ENST00000494945 GRM8O00222 908 aa13.81□□□□□ -0.2
PKP4-215ENST00000494945 GCKRQ14397 625 aa13.81□□□□□ -0.2
PKP4-215ENST00000494945 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
PKP4-215ENST00000494945 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
PKP4-215ENST00000494945 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
PKP4-215ENST00000494945 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
PKP4-215ENST00000494945 HMMRO75330 724 aa13.8□□□□□ -0.2
PKP4-215ENST00000494945 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
PKP4-215ENST00000494945 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
PKP4-215ENST00000494945 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
PKP4-215ENST00000494945 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
PKP4-215ENST00000494945 ISCA1Q9BUE6 129 aa13.8□□□□□ -0.2
PKP4-215ENST00000494945 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
PKP4-215ENST00000494945 PLSCR1O15162 318 aa13.79□□□□□ -0.2
PKP4-215ENST00000494945 RGL2O15211 777 aa13.79□□□□□ -0.2
PKP4-215ENST00000494945 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
PKP4-215ENST00000494945 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
PKP4-215ENST00000494945 GCC1Q96CN9 775 aa13.79□□□□□ -0.2
PKP4-215ENST00000494945 CWC25Q9NXE8 425 aaPredicted RBP13.79□□□□□ -0.2
PKP4-215ENST00000494945 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
PKP4-215ENST00000494945 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
PKP4-215ENST00000494945 RPS6KA4O75676 772 aa13.78□□□□□ -0.2
PKP4-215ENST00000494945 ARXQ96QS3 562 aa13.78□□□□□ -0.2
PKP4-215ENST00000494945 KCNQ4P56696 695 aa13.77□□□□□ -0.21
PKP4-215ENST00000494945 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
PKP4-215ENST00000494945 SPEF2Q9C093 1822 aa13.77□□□□□ -0.21
PKP4-215ENST00000494945 TBC1D2BQ9UPU7 963 aa13.77□□□□□ -0.21
PKP4-215ENST00000494945 H7C1W4 665 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 GNPATO15228 680 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 MTX1Q13505 466 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 HLFQ16534 295 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
PKP4-215ENST00000494945 RTCBQ9Y3I0 505 aaKnown RBP13.76□□□□□ -0.21
PKP4-215ENST00000494945 APBA3O96018 575 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 ADRA2BP18089 450 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 CASP7P55210 303 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 CLEC4GQ6UXB4 293 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 UBE3BQ7Z3V4 1068 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms