RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 NEFMP07197 916 aa15.52■□□□□ 0.08
RAPGEF3-213ENST00000494764 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
RAPGEF3-213ENST00000494764 KLRG1Q96E93 195 aa15.52■□□□□ 0.08
RAPGEF3-213ENST00000494764 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
RAPGEF3-213ENST00000494764 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-213ENST00000494764 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
RAPGEF3-213ENST00000494764 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
RAPGEF3-213ENST00000494764 NBPF5PQ86XG9 351 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-213ENST00000494764 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
RAPGEF3-213ENST00000494764 SRGNP10124 158 aa15.5■□□□□ 0.07
RAPGEF3-213ENST00000494764 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
RAPGEF3-213ENST00000494764 SCN7AQ01118 1682 aa15.5■□□□□ 0.07
RAPGEF3-213ENST00000494764 DICER1Q9UPY3 1922 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-213ENST00000494764 SOGA3Q5TF21 947 aa15.49■□□□□ 0.07
RAPGEF3-213ENST00000494764 MIS18AQ9NYP9 233 aa15.49■□□□□ 0.07
RAPGEF3-213ENST00000494764 FER1L6Q2WGJ9 1857 aa15.48■□□□□ 0.07
RAPGEF3-213ENST00000494764 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-213ENST00000494764 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
RAPGEF3-213ENST00000494764 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
RAPGEF3-213ENST00000494764 CACNA1SQ13698 1873 aa15.48■□□□□ 0.07
RAPGEF3-213ENST00000494764 SLX4Q8IY92 1834 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 PCNTO95613 3336 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 FAM177BA6PVY3 158 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 POTECB2RU33 542 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 NBPF26B4DH59 902 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 NBPF10Q6P3W6 841 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 TIAM2Q8IVF5 1701 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 NBPF15Q8N660 670 aa15.47■□□□□ 0.07
RAPGEF3-213ENST00000494764 LTBP3Q9NS15 1303 aa15.46■□□□□ 0.07
RAPGEF3-213ENST00000494764 NPR1P16066 1061 aa15.46■□□□□ 0.07
RAPGEF3-213ENST00000494764 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
RAPGEF3-213ENST00000494764 PNISRQ8TF01 805 aaKnown RBP15.46■□□□□ 0.07
RAPGEF3-213ENST00000494764 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.06
RAPGEF3-213ENST00000494764 BCORQ6W2J9 1755 aa15.45■□□□□ 0.06
RAPGEF3-213ENST00000494764 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
RAPGEF3-213ENST00000494764 PNNQ9H307 717 aaKnown RBP15.45■□□□□ 0.06
RAPGEF3-213ENST00000494764 RGL2O15211 777 aa15.44■□□□□ 0.06
RAPGEF3-213ENST00000494764 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
RAPGEF3-213ENST00000494764 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
RAPGEF3-213ENST00000494764 HLFQ16534 295 aa15.44■□□□□ 0.06
RAPGEF3-213ENST00000494764 KLRG2A4D1S0 409 aaPredicted RBP15.43■□□□□ 0.06
RAPGEF3-213ENST00000494764 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
RAPGEF3-213ENST00000494764 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
RAPGEF3-213ENST00000494764 RRP7AQ9Y3A4 280 aaKnown RBP15.43■□□□□ 0.06
RAPGEF3-213ENST00000494764 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
RAPGEF3-213ENST00000494764 ERVV-1B6SEH8 477 aa15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 NFE2L2Q16236 605 aa15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 NYXQ9GZU5 481 aa15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 ARFGEF2Q9Y6D5 1785 aa15.41■□□□□ 0.06
RAPGEF3-213ENST00000494764 MYL6BP14649 208 aa15.4■□□□□ 0.06
RAPGEF3-213ENST00000494764 EIF4A1P60842 406 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-213ENST00000494764 KIF6Q6ZMV9 814 aa15.4■□□□□ 0.06
RAPGEF3-213ENST00000494764 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
RAPGEF3-213ENST00000494764 IQCA1LA6NCM1 817 aa15.39■□□□□ 0.05
RAPGEF3-213ENST00000494764 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
RAPGEF3-213ENST00000494764 ZNF277Q9NRM2 450 aaPredicted RBP15.39■□□□□ 0.05
RAPGEF3-213ENST00000494764 MAPK8IP3Q9UPT6 1336 aa15.39■□□□□ 0.05
RAPGEF3-213ENST00000494764 NUP98P52948 1817 aa15.38■□□□□ 0.05
RAPGEF3-213ENST00000494764 OLFM4Q6UX06 510 aa15.38■□□□□ 0.05
RAPGEF3-213ENST00000494764 NUTM1Q86Y26 1132 aa15.38■□□□□ 0.05
RAPGEF3-213ENST00000494764 SYNE4Q8N205 404 aa15.38■□□□□ 0.05
RAPGEF3-213ENST00000494764 MAP3K15Q6ZN16 1313 aa15.38■□□□□ 0.05
RAPGEF3-213ENST00000494764 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
RAPGEF3-213ENST00000494764 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
RAPGEF3-213ENST00000494764 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
RAPGEF3-213ENST00000494764 THUMPD2Q9BTF0 503 aaKnown RBP15.37■□□□□ 0.05
RAPGEF3-213ENST00000494764 GPTP24298 496 aa15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 RPGRQ92834 1020 aaKnown RBP15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 ZBTB3Q9H5J0 574 aa15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 SCN4AP35499 1836 aa15.36■□□□□ 0.05
RAPGEF3-213ENST00000494764 KDM3BQ7LBC6 1761 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 RIPK4P57078 832 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 CC2D2BQ6DHV5 1058 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 JDP2Q8WYK2 163 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
RAPGEF3-213ENST00000494764 HSPA1AP0DMV8 641 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 HSPA1BP0DMV9 641 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 GIGYF2Q6Y7W6 1299 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-213ENST00000494764 FZD9O00144 591 aa15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms