RNA–Protein interactions for RNA: ENST00000494756.1

RPS27A-209, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-209ENST00000494756 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
RPS27A-209ENST00000494756 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
RPS27A-209ENST00000494756 CACNA1SQ13698 1873 aa14.04□□□□□ -0.16
RPS27A-209ENST00000494756 ST5P78524 1137 aa14.03□□□□□ -0.16
RPS27A-209ENST00000494756 IL17REQ8NFR9 667 aa14.03□□□□□ -0.16
RPS27A-209ENST00000494756 MASTLQ96GX5 879 aa14.03□□□□□ -0.16
RPS27A-209ENST00000494756 SETDB2Q96T68 719 aa14.03□□□□□ -0.16
RPS27A-209ENST00000494756 TAF1DQ9H5J8 278 aaPredicted RBP14.03□□□□□ -0.16
RPS27A-209ENST00000494756 ZNF330Q9Y3S2 320 aaPredicted RBP14.03□□□□□ -0.16
RPS27A-209ENST00000494756 CEMIPQ8WUJ3 1361 aa14.02□□□□□ -0.17
RPS27A-209ENST00000494756 TEFQ10587 303 aa14.02□□□□□ -0.17
RPS27A-209ENST00000494756 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.17
RPS27A-209ENST00000494756 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.17
RPS27A-209ENST00000494756 ADAMTSL1Q8N6G6 1762 aa14.01□□□□□ -0.17
RPS27A-209ENST00000494756 GNAT3A8MTJ3 354 aa14.01□□□□□ -0.17
RPS27A-209ENST00000494756 NPHP1O15259 732 aa14.01□□□□□ -0.17
RPS27A-209ENST00000494756 A1BGP04217 495 aa14.01□□□□□ -0.17
RPS27A-209ENST00000494756 CCDC93Q567U6 631 aa14.01□□□□□ -0.17
RPS27A-209ENST00000494756 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
RPS27A-209ENST00000494756 CTCFP49711 727 aaPredicted RBP14□□□□□ -0.17
RPS27A-209ENST00000494756 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
RPS27A-209ENST00000494756 TMEM88BA6NKF7 163 aa13.99□□□□□ -0.17
RPS27A-209ENST00000494756 ITGBL1O95965 494 aaPredicted RBP13.99□□□□□ -0.17
RPS27A-209ENST00000494756 VEGFBP49765 207 aa13.99□□□□□ -0.17
RPS27A-209ENST00000494756 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
RPS27A-209ENST00000494756 AIDAQ96BJ3 306 aa13.99□□□□□ -0.17
RPS27A-209ENST00000494756 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
RPS27A-209ENST00000494756 ZNF541Q9H0D2 1346 aa13.98□□□□□ -0.17
RPS27A-209ENST00000494756 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
RPS27A-209ENST00000494756 PER1O15534 1290 aaPredicted RBP13.98□□□□□ -0.17
RPS27A-209ENST00000494756 NPR1P16066 1061 aa13.98□□□□□ -0.17
RPS27A-209ENST00000494756 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
RPS27A-209ENST00000494756 CLEC4GQ6UXB4 293 aa13.98□□□□□ -0.17
RPS27A-209ENST00000494756 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
RPS27A-209ENST00000494756 RGL2O15211 777 aa13.97□□□□□ -0.17
RPS27A-209ENST00000494756 NBPF5PQ86XG9 351 aaPredicted RBP13.97□□□□□ -0.17
RPS27A-209ENST00000494756 ZNF277Q9NRM2 450 aaPredicted RBP13.97□□□□□ -0.17
RPS27A-209ENST00000494756 HACL1Q9UJ83 578 aa13.97□□□□□ -0.17
RPS27A-209ENST00000494756 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
RPS27A-209ENST00000494756 RASSF10A6NK89 507 aa13.96□□□□□ -0.17
RPS27A-209ENST00000494756 KCNQ3O43525 872 aa13.96□□□□□ -0.17
RPS27A-209ENST00000494756 EPHX2P34913 555 aa13.96□□□□□ -0.17
RPS27A-209ENST00000494756 EAPPQ56P03 285 aaPredicted RBP13.96□□□□□ -0.17
RPS27A-209ENST00000494756 CC2D1BQ5T0F9 858 aaKnown RBP13.96□□□□□ -0.17
RPS27A-209ENST00000494756 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.17
RPS27A-209ENST00000494756 SNED1Q8TER0 1413 aa13.96□□□□□ -0.18
RPS27A-209ENST00000494756 BTBD11A6QL63 1104 aa13.95□□□□□ -0.18
RPS27A-209ENST00000494756 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
RPS27A-209ENST00000494756 RTKN2Q8IZC4 609 aa13.95□□□□□ -0.18
RPS27A-209ENST00000494756 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
RPS27A-209ENST00000494756 RNF123Q5XPI4 1314 aa13.94□□□□□ -0.18
RPS27A-209ENST00000494756 THSD7BQ9C0I4 1608 aa13.94□□□□□ -0.18
RPS27A-209ENST00000494756 FZD9O00144 591 aa13.94□□□□□ -0.18
RPS27A-209ENST00000494756 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
RPS27A-209ENST00000494756 LBX1P52954 281 aa13.94□□□□□ -0.18
RPS27A-209ENST00000494756 OLFM4Q6UX06 510 aa13.94□□□□□ -0.18
RPS27A-209ENST00000494756 PNMA8AQ86V59 439 aaPredicted RBP13.94□□□□□ -0.18
RPS27A-209ENST00000494756 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
RPS27A-209ENST00000494756 IARSP41252 1262 aaKnown RBP13.93□□□□□ -0.18
RPS27A-209ENST00000494756 CNTROBQ8N137 903 aa13.93□□□□□ -0.18
RPS27A-209ENST00000494756 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPS27A-209ENST00000494756 PRAMEF22A3QJZ6 481 aa13.92□□□□□ -0.18
RPS27A-209ENST00000494756 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
RPS27A-209ENST00000494756 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
RPS27A-209ENST00000494756 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
RPS27A-209ENST00000494756 GPC2Q8N158 579 aa13.92□□□□□ -0.18
RPS27A-209ENST00000494756 PHACTR3Q96KR7 559 aa13.92□□□□□ -0.18
RPS27A-209ENST00000494756 RSPH6AQ9H0K4 717 aa13.92□□□□□ -0.18
RPS27A-209ENST00000494756 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
RPS27A-209ENST00000494756 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 SLC34A2O95436 690 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 MAP2K1Q02750 393 aaPredicted RBP13.91□□□□□ -0.18
RPS27A-209ENST00000494756 DEFB115Q30KQ5 88 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
RPS27A-209ENST00000494756 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 PSMD1Q99460 953 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 COL4A5P29400 1685 aa13.91□□□□□ -0.18
RPS27A-209ENST00000494756 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.18
RPS27A-209ENST00000494756 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
RPS27A-209ENST00000494756 ALDH1B1P30837 517 aa13.9□□□□□ -0.18
RPS27A-209ENST00000494756 CRY2Q49AN0 593 aa13.9□□□□□ -0.18
RPS27A-209ENST00000494756 SYNE4Q8N205 404 aa13.9□□□□□ -0.18
RPS27A-209ENST00000494756 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
RPS27A-209ENST00000494756 ABCC12Q96J65 1359 aa13.9□□□□□ -0.18
RPS27A-209ENST00000494756 DDX21Q9NR30 783 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPS27A-209ENST00000494756 ABT1Q9ULW3 272 aaKnown RBP13.89□□□□□ -0.19
RPS27A-209ENST00000494756 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
RPS27A-209ENST00000494756 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
RPS27A-209ENST00000494756 CC2D2BQ6DHV5 1058 aa13.88□□□□□ -0.19
RPS27A-209ENST00000494756 JDP2Q8WYK2 163 aa13.88□□□□□ -0.19
RPS27A-209ENST00000494756 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
RPS27A-209ENST00000494756 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
RPS27A-209ENST00000494756 SCNN1DP51172 638 aa13.87□□□□□ -0.19
RPS27A-209ENST00000494756 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
RPS27A-209ENST00000494756 HLFQ16534 295 aa13.87□□□□□ -0.19
RPS27A-209ENST00000494756 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
RPS27A-209ENST00000494756 MCM10Q7L590 875 aa13.87□□□□□ -0.19
RPS27A-209ENST00000494756 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
RPS27A-209ENST00000494756 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms