RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 AK9Q5TCS8 1911 aa18.99■□□□□ 0.63
PDZRN3-211ENST00000494559 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
PDZRN3-211ENST00000494559 TRIM6-TRIM34B2RNG4 842 aa18.99■□□□□ 0.63
PDZRN3-211ENST00000494559 RILPL2Q969X0 211 aa18.99■□□□□ 0.63
PDZRN3-211ENST00000494559 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
PDZRN3-211ENST00000494559 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
PDZRN3-211ENST00000494559 GCKRQ14397 625 aa18.98■□□□□ 0.63
PDZRN3-211ENST00000494559 BICC1Q9H694 974 aaKnown RBP18.98■□□□□ 0.63
PDZRN3-211ENST00000494559 STRN4Q9NRL3 753 aa18.98■□□□□ 0.63
PDZRN3-211ENST00000494559 MYD88Q99836 296 aa18.97■□□□□ 0.63
PDZRN3-211ENST00000494559 PA2G4Q9UQ80 394 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-211ENST00000494559 AFDNP55196 1824 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-211ENST00000494559 EVA1CP58658 441 aa18.97■□□□□ 0.63
PDZRN3-211ENST00000494559 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
PDZRN3-211ENST00000494559 TOGARAM1Q9Y4F4 1720 aa18.96■□□□□ 0.63
PDZRN3-211ENST00000494559 OS9Q13438 667 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-211ENST00000494559 ERC1Q8IUD2 1116 aa18.96■□□□□ 0.63
PDZRN3-211ENST00000494559 TTC41PQ6P2S7 1318 aa18.95■□□□□ 0.62
PDZRN3-211ENST00000494559 DDX54Q8TDD1 881 aaKnown RBP18.95■□□□□ 0.62
PDZRN3-211ENST00000494559 CIZ1Q9ULV3 898 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-211ENST00000494559 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
PDZRN3-211ENST00000494559 NBPF26B4DH59 902 aa18.94■□□□□ 0.62
PDZRN3-211ENST00000494559 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
PDZRN3-211ENST00000494559 NBPF10Q6P3W6 841 aaKnown RBP18.94■□□□□ 0.62
PDZRN3-211ENST00000494559 NBPF15Q8N660 670 aa18.94■□□□□ 0.62
PDZRN3-211ENST00000494559 CLASRPQ8N2M8 674 aaKnown RBP18.94■□□□□ 0.62
PDZRN3-211ENST00000494559 PLBD2Q8NHP8 589 aa18.94■□□□□ 0.62
PDZRN3-211ENST00000494559 GSE1Q14687 1217 aa18.93■□□□□ 0.62
PDZRN3-211ENST00000494559 COL15A1P39059 1388 aa18.93■□□□□ 0.62
PDZRN3-211ENST00000494559 EPHA10Q5JZY3 1008 aa18.93■□□□□ 0.62
PDZRN3-211ENST00000494559 NUP188Q5SRE5 1749 aa18.92■□□□□ 0.62
PDZRN3-211ENST00000494559 SASH1O94885 1247 aa18.92■□□□□ 0.62
PDZRN3-211ENST00000494559 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 MAP4K4O95819 1239 aaPredicted RBP18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 IL25Q9H293 177 aa18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 EPB41L2O43491 1005 aaKnown RBP18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 BTG4Q9NY30 223 aa18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.91■□□□□ 0.62
PDZRN3-211ENST00000494559 MCM4P33991 863 aa18.9■□□□□ 0.62
PDZRN3-211ENST00000494559 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.62
PDZRN3-211ENST00000494559 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
PDZRN3-211ENST00000494559 IL17RAQ96F46 866 aa18.9■□□□□ 0.62
PDZRN3-211ENST00000494559 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
PDZRN3-211ENST00000494559 CASP7P55210 303 aa18.89■□□□□ 0.62
PDZRN3-211ENST00000494559 ECHDC1Q9NTX5 307 aa18.89■□□□□ 0.62
PDZRN3-211ENST00000494559 COL22A1Q8NFW1 1626 aaPredicted RBP18.89■□□□□ 0.62
PDZRN3-211ENST00000494559 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-211ENST00000494559 RABL6Q3YEC7 729 aaPredicted RBP18.89■□□□□ 0.61
PDZRN3-211ENST00000494559 ANO2Q9NQ90 1003 aa18.89■□□□□ 0.61
PDZRN3-211ENST00000494559 DISP2A7MBM2 1401 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 ATP5J2-PTCD1G3V325 749 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 ST18O60284 1047 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 PTCD1O75127 700 aaKnown RBP18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 A1BGP04217 495 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 IFIT2P09913 472 aaKnown RBP18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 ANAPC15P60006 121 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 RAB3GAP1Q15042 981 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 FOXD4L1Q9NU39 408 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 RFX5P48382 616 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 AACSQ86V21 672 aa18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 JARID2Q92833 1246 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-211ENST00000494559 COL16A1Q07092 1604 aaPredicted RBP18.87■□□□□ 0.61
PDZRN3-211ENST00000494559 SGSM2O43147 1006 aa18.87■□□□□ 0.61
PDZRN3-211ENST00000494559 MCCP23508 829 aa18.87■□□□□ 0.61
PDZRN3-211ENST00000494559 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
PDZRN3-211ENST00000494559 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
PDZRN3-211ENST00000494559 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
PDZRN3-211ENST00000494559 A0A087WZG4 1122 aa18.86■□□□□ 0.61
PDZRN3-211ENST00000494559 KLHDC4Q8TBB5 520 aa18.86■□□□□ 0.61
PDZRN3-211ENST00000494559 TJP1Q07157 1748 aa18.86■□□□□ 0.61
PDZRN3-211ENST00000494559 ITGB4P16144 1822 aa18.86■□□□□ 0.61
PDZRN3-211ENST00000494559 SIL1Q9H173 461 aa18.86■□□□□ 0.61
PDZRN3-211ENST00000494559 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
PDZRN3-211ENST00000494559 PLCH1Q4KWH8 1693 aa18.85■□□□□ 0.61
PDZRN3-211ENST00000494559 H7C1W4 665 aa18.85■□□□□ 0.61
PDZRN3-211ENST00000494559 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
PDZRN3-211ENST00000494559 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
PDZRN3-211ENST00000494559 HSPA4P34932 840 aa18.83■□□□□ 0.61
PDZRN3-211ENST00000494559 PIGBQ92521 554 aa18.83■□□□□ 0.61
PDZRN3-211ENST00000494559 LSG1Q9H089 658 aaKnown RBP18.83■□□□□ 0.61
PDZRN3-211ENST00000494559 CCDC8Q9H0W5 538 aaPredicted RBP18.83■□□□□ 0.61
PDZRN3-211ENST00000494559 RAD50Q92878 1312 aa18.83■□□□□ 0.61
PDZRN3-211ENST00000494559 NEK4P51957 841 aa18.83■□□□□ 0.6
PDZRN3-211ENST00000494559 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
PDZRN3-211ENST00000494559 EVI5LQ96CN4 794 aa18.82■□□□□ 0.6
PDZRN3-211ENST00000494559 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
PDZRN3-211ENST00000494559 WNK3Q9BYP7 1800 aa18.82■□□□□ 0.6
PDZRN3-211ENST00000494559 FOXO4P98177 505 aa18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 VSIG10Q8N0Z9 540 aa18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 CWC25Q9NXE8 425 aaPredicted RBP18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 LRP6O75581 1613 aa18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 LTBP4Q8N2S1 1624 aa18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 CWC27Q6UX04 472 aaKnown RBP18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
PDZRN3-211ENST00000494559 MCM2P49736 904 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms