RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 NFKBIEO00221 500 aa13.68□□□□□ -0.22
NUDCD3-210ENST00000493613 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-210ENST00000493613 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
NUDCD3-210ENST00000493613 DNAJC5GQ8N7S2 189 aa13.68□□□□□ -0.22
NUDCD3-210ENST00000493613 GLTPD2A6NH11 291 aa13.67□□□□□ -0.22
NUDCD3-210ENST00000493613 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-210ENST00000493613 C21orf2O43822 256 aa13.67□□□□□ -0.22
NUDCD3-210ENST00000493613 ST5P78524 1137 aa13.67□□□□□ -0.22
NUDCD3-210ENST00000493613 ZNF219Q9P2Y4 722 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-210ENST00000493613 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
NUDCD3-210ENST00000493613 SCN4AP35499 1836 aa13.66□□□□□ -0.22
NUDCD3-210ENST00000493613 SRGNP10124 158 aa13.65□□□□□ -0.22
NUDCD3-210ENST00000493613 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
NUDCD3-210ENST00000493613 HTRA3P83110 453 aa13.65□□□□□ -0.22
NUDCD3-210ENST00000493613 CLEC4GQ6UXB4 293 aa13.65□□□□□ -0.22
NUDCD3-210ENST00000493613 SMC1BQ8NDV3 1235 aa13.65□□□□□ -0.22
NUDCD3-210ENST00000493613 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 NEFMP07197 916 aa13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 NBPF5PQ86XG9 351 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 CNKSR1Q969H4 720 aa13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 LTBP3Q9NS15 1303 aa13.64□□□□□ -0.23
NUDCD3-210ENST00000493613 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 DPY19L2Q6NUT2 758 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 NBPF10Q6P3W6 841 aaKnown RBP13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 MIS18AQ9NYP9 233 aa13.63□□□□□ -0.23
NUDCD3-210ENST00000493613 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
NUDCD3-210ENST00000493613 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
NUDCD3-210ENST00000493613 RGL2O15211 777 aa13.61□□□□□ -0.23
NUDCD3-210ENST00000493613 TPTE2Q6XPS3 522 aa13.61□□□□□ -0.23
NUDCD3-210ENST00000493613 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
NUDCD3-210ENST00000493613 LAMB2P55268 1798 aa13.6□□□□□ -0.23
NUDCD3-210ENST00000493613 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
NUDCD3-210ENST00000493613 POTECB2RU33 542 aa13.6□□□□□ -0.23
NUDCD3-210ENST00000493613 NPR1P16066 1061 aa13.6□□□□□ -0.23
NUDCD3-210ENST00000493613 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-210ENST00000493613 HLFQ16534 295 aa13.59□□□□□ -0.23
NUDCD3-210ENST00000493613 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
NUDCD3-210ENST00000493613 KLRG2A4D1S0 409 aaPredicted RBP13.58□□□□□ -0.24
NUDCD3-210ENST00000493613 NFE2L2Q16236 605 aa13.58□□□□□ -0.24
NUDCD3-210ENST00000493613 CCDC93Q567U6 631 aa13.58□□□□□ -0.24
NUDCD3-210ENST00000493613 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
NUDCD3-210ENST00000493613 JMYQ8N9B5 988 aa13.58□□□□□ -0.24
NUDCD3-210ENST00000493613 MAPK8IP3Q9UPT6 1336 aa13.58□□□□□ -0.24
NUDCD3-210ENST00000493613 DDNO94850 711 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 GTF2E1P29083 439 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 EIF4A1P60842 406 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 C7orf43Q8WVR3 580 aa13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 THUMPD2Q9BTF0 503 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-210ENST00000493613 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 MYL6BP14649 208 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 ALDH1B1P30837 517 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 MAP3K15Q6ZN16 1313 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 ABCC12Q96J65 1359 aa13.56□□□□□ -0.24
NUDCD3-210ENST00000493613 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
NUDCD3-210ENST00000493613 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
NUDCD3-210ENST00000493613 RIC1Q4ADV7 1423 aa13.55□□□□□ -0.24
NUDCD3-210ENST00000493613 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 NUTM1Q86Y26 1132 aa13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 TAF1P21675 1872 aa13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-210ENST00000493613 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
NUDCD3-210ENST00000493613 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
NUDCD3-210ENST00000493613 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
NUDCD3-210ENST00000493613 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
NUDCD3-210ENST00000493613 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
NUDCD3-210ENST00000493613 GPTP24298 496 aa13.52□□□□□ -0.25
NUDCD3-210ENST00000493613 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-210ENST00000493613 TSPYL4Q9UJ04 414 aa13.52□□□□□ -0.25
NUDCD3-210ENST00000493613 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
NUDCD3-210ENST00000493613 ZNF541Q9H0D2 1346 aa13.52□□□□□ -0.25
NUDCD3-210ENST00000493613 SNED1Q8TER0 1413 aa13.52□□□□□ -0.25
NUDCD3-210ENST00000493613 TRPM7Q96QT4 1865 aa13.51□□□□□ -0.25
NUDCD3-210ENST00000493613 DDX60Q8IY21 1712 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-210ENST00000493613 IARSP41252 1262 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-210ENST00000493613 RIPK4P57078 832 aa13.51□□□□□ -0.25
NUDCD3-210ENST00000493613 RPGRQ92834 1020 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-210ENST00000493613 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 COL4A5P29400 1685 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 RALBP1Q15311 655 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 COL13A1Q5TAT6 717 aaPredicted RBP13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 LDHDQ86WU2 507 aa13.5□□□□□ -0.25
NUDCD3-210ENST00000493613 ZNF34Q8IZ26 560 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms