RNA–Protein interactions for RNA: ENST00000493403.1

ARPC1B-221, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-221ENST00000493403 CAMTA2O94983 1202 aa22.25■■□□□ 1.15
ARPC1B-221ENST00000493403 CCDC93Q567U6 631 aa22.25■■□□□ 1.15
ARPC1B-221ENST00000493403 AIDAQ96BJ3 306 aa22.25■■□□□ 1.15
ARPC1B-221ENST00000493403 MKRN1Q9UHC7 482 aaKnown RBP22.25■■□□□ 1.15
ARPC1B-221ENST00000493403 SIPA1L3O60292 1781 aaPredicted RBP22.25■■□□□ 1.15
ARPC1B-221ENST00000493403 IL17REQ8NFR9 667 aa22.24■■□□□ 1.15
ARPC1B-221ENST00000493403 ZNF219Q9P2Y4 722 aaPredicted RBP22.24■■□□□ 1.15
ARPC1B-221ENST00000493403 PASKQ96RG2 1323 aa22.24■■□□□ 1.15
ARPC1B-221ENST00000493403 NPC1L1Q9UHC9 1359 aa22.24■■□□□ 1.15
ARPC1B-221ENST00000493403 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
ARPC1B-221ENST00000493403 CEMIPQ8WUJ3 1361 aa22.23■■□□□ 1.15
ARPC1B-221ENST00000493403 BCORQ6W2J9 1755 aa22.22■■□□□ 1.15
ARPC1B-221ENST00000493403 SLX4Q8IY92 1834 aa22.22■■□□□ 1.15
ARPC1B-221ENST00000493403 TMEM88BA6NKF7 163 aa22.22■■□□□ 1.15
ARPC1B-221ENST00000493403 NPR1P16066 1061 aa22.22■■□□□ 1.15
ARPC1B-221ENST00000493403 CTCFP49711 727 aaPredicted RBP22.22■■□□□ 1.15
ARPC1B-221ENST00000493403 TAF1DQ9H5J8 278 aaPredicted RBP22.22■■□□□ 1.15
ARPC1B-221ENST00000493403 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
ARPC1B-221ENST00000493403 PNMA8AQ86V59 439 aaPredicted RBP22.21■■□□□ 1.15
ARPC1B-221ENST00000493403 NBPF5PQ86XG9 351 aaPredicted RBP22.21■■□□□ 1.15
ARPC1B-221ENST00000493403 RTKN2Q8IZC4 609 aa22.21■■□□□ 1.15
ARPC1B-221ENST00000493403 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
ARPC1B-221ENST00000493403 BTBD11A6QL63 1104 aa22.2■■□□□ 1.14
ARPC1B-221ENST00000493403 FKBP4Q02790 459 aaKnown RBP eCLIP22.2■■□□□ 1.14
ARPC1B-221ENST00000493403 TPTE2Q6XPS3 522 aa22.2■■□□□ 1.14
ARPC1B-221ENST00000493403 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.14
ARPC1B-221ENST00000493403 KLRG2A4D1S0 409 aaPredicted RBP22.19■■□□□ 1.14
ARPC1B-221ENST00000493403 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
ARPC1B-221ENST00000493403 A1BGP04217 495 aa22.19■■□□□ 1.14
ARPC1B-221ENST00000493403 KIF7Q2M1P5 1343 aa22.19■■□□□ 1.14
ARPC1B-221ENST00000493403 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
ARPC1B-221ENST00000493403 FOXN1O15353 648 aa22.18■■□□□ 1.14
ARPC1B-221ENST00000493403 CCDC24Q8N4L8 307 aa22.18■■□□□ 1.14
ARPC1B-221ENST00000493403 HACL1Q9UJ83 578 aa22.18■■□□□ 1.14
ARPC1B-221ENST00000493403 CACNA1SQ13698 1873 aa22.17■■□□□ 1.14
ARPC1B-221ENST00000493403 POTEIP0CG38 1075 aa22.17■■□□□ 1.14
ARPC1B-221ENST00000493403 POTEJP0CG39 1038 aa22.17■■□□□ 1.14
ARPC1B-221ENST00000493403 ALDH1B1P30837 517 aa22.17■■□□□ 1.14
ARPC1B-221ENST00000493403 CC2D1BQ5T0F9 858 aaKnown RBP22.17■■□□□ 1.14
ARPC1B-221ENST00000493403 SNRPA1P09661 255 aaKnown RBP22.16■■□□□ 1.14
ARPC1B-221ENST00000493403 ITGBL1O95965 494 aaPredicted RBP22.15■■□□□ 1.14
ARPC1B-221ENST00000493403 GRIPAP1Q4V328 841 aa22.15■■□□□ 1.14
ARPC1B-221ENST00000493403 EPHX2P34913 555 aa22.14■■□□□ 1.13
ARPC1B-221ENST00000493403 CC2D2BQ6DHV5 1058 aa22.14■■□□□ 1.13
ARPC1B-221ENST00000493403 CFAP53Q96M91 514 aa22.14■■□□□ 1.13
ARPC1B-221ENST00000493403 RASSF10A6NK89 507 aa22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 VEGFBP49765 207 aa22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 MAP2K1Q02750 393 aaPredicted RBP22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 EAPPQ56P03 285 aaPredicted RBP22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 GPC2Q8N158 579 aa22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 RTF1Q92541 710 aaKnown RBP22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 WBP1LQ9NX94 342 aa22.13■■□□□ 1.13
ARPC1B-221ENST00000493403 FZD9O00144 591 aa22.12■■□□□ 1.13
ARPC1B-221ENST00000493403 CLEC11AQ9Y240 323 aa22.12■■□□□ 1.13
ARPC1B-221ENST00000493403 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
ARPC1B-221ENST00000493403 USP16Q9Y5T5 823 aa22.12■■□□□ 1.13
ARPC1B-221ENST00000493403 ADAMTSL1Q8N6G6 1762 aa22.12■■□□□ 1.13
ARPC1B-221ENST00000493403 IARSP41252 1262 aaKnown RBP22.11■■□□□ 1.13
ARPC1B-221ENST00000493403 DEFB115Q30KQ5 88 aa22.11■■□□□ 1.13
ARPC1B-221ENST00000493403 JDP2Q8WYK2 163 aa22.11■■□□□ 1.13
ARPC1B-221ENST00000493403 PSMD1Q99460 953 aa22.11■■□□□ 1.13
ARPC1B-221ENST00000493403 NIP7Q9Y221 180 aaKnown RBP eCLIP22.11■■□□□ 1.13
ARPC1B-221ENST00000493403 HTATSF1O43719 755 aaKnown RBP22.1■■□□□ 1.13
ARPC1B-221ENST00000493403 CNTROBQ8N137 903 aa22.1■■□□□ 1.13
ARPC1B-221ENST00000493403 NYXQ9GZU5 481 aa22.1■■□□□ 1.13
ARPC1B-221ENST00000493403 ZNF277Q9NRM2 450 aaPredicted RBP22.1■■□□□ 1.13
ARPC1B-221ENST00000493403 ZNF541Q9H0D2 1346 aa22.09■■□□□ 1.13
ARPC1B-221ENST00000493403 GTF2E1P29083 439 aaPredicted RBP22.09■■□□□ 1.13
ARPC1B-221ENST00000493403 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
ARPC1B-221ENST00000493403 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.13
ARPC1B-221ENST00000493403 KCNQ3O43525 872 aa22.07■■□□□ 1.12
ARPC1B-221ENST00000493403 LMOD1P29536 600 aaPredicted RBP22.06■■□□□ 1.12
ARPC1B-221ENST00000493403 EIF6P56537 245 aaKnown RBP22.06■■□□□ 1.12
ARPC1B-221ENST00000493403 CRY2Q49AN0 593 aa22.06■■□□□ 1.12
ARPC1B-221ENST00000493403 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
ARPC1B-221ENST00000493403 RNF123Q5XPI4 1314 aa22.06■■□□□ 1.12
ARPC1B-221ENST00000493403 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
ARPC1B-221ENST00000493403 ECE1P42892 770 aa22.05■■□□□ 1.12
ARPC1B-221ENST00000493403 LBX1P52954 281 aa22.05■■□□□ 1.12
ARPC1B-221ENST00000493403 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
ARPC1B-221ENST00000493403 PHACTR3Q96KR7 559 aa22.05■■□□□ 1.12
ARPC1B-221ENST00000493403 RIC1Q4ADV7 1423 aa22.05■■□□□ 1.12
ARPC1B-221ENST00000493403 ERVV-1B6SEH8 477 aa22.04■■□□□ 1.12
ARPC1B-221ENST00000493403 BEGAINQ9BUH8 593 aa22.04■■□□□ 1.12
ARPC1B-221ENST00000493403 ABT1Q9ULW3 272 aaKnown RBP22.04■■□□□ 1.12
ARPC1B-221ENST00000493403 IBTKQ9P2D0 1353 aaPredicted RBP22.03■■□□□ 1.12
ARPC1B-221ENST00000493403 MAP1SQ66K74 1059 aaPredicted RBP22.03■■□□□ 1.12
ARPC1B-221ENST00000493403 HSPA8P11142 646 aaKnown RBP22.02■■□□□ 1.12
ARPC1B-221ENST00000493403 PIP4K2AP48426 406 aaPredicted RBP22.02■■□□□ 1.12
ARPC1B-221ENST00000493403 PNISRQ8TF01 805 aaKnown RBP22.02■■□□□ 1.12
ARPC1B-221ENST00000493403 VPS33BQ9H267 617 aa22.02■■□□□ 1.12
ARPC1B-221ENST00000493403 DDX21Q9NR30 783 aaKnown RBP eCLIP22.02■■□□□ 1.12
ARPC1B-221ENST00000493403 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
ARPC1B-221ENST00000493403 NBPF26B4DH59 902 aa22.01■■□□□ 1.11
ARPC1B-221ENST00000493403 NBPF10Q6P3W6 841 aaKnown RBP22.01■■□□□ 1.11
ARPC1B-221ENST00000493403 USP50Q70EL3 339 aaPredicted RBP22.01■■□□□ 1.11
ARPC1B-221ENST00000493403 NBPF15Q8N660 670 aa22.01■■□□□ 1.11
ARPC1B-221ENST00000493403 RPGRQ92834 1020 aaKnown RBP22.01■■□□□ 1.11
ARPC1B-221ENST00000493403 PRAMEF22A3QJZ6 481 aa22■■□□□ 1.11
ARPC1B-221ENST00000493403 HOXA10P31260 410 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms