RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CAMTA2O94983 1202 aa14.77□□□□□ -0.05
SNRNP200-207ENST00000493271 CC2D1BQ5T0F9 858 aaKnown RBP14.77□□□□□ -0.05
SNRNP200-207ENST00000493271 ARFGEF2Q9Y6D5 1785 aa14.77□□□□□ -0.05
SNRNP200-207ENST00000493271 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
SNRNP200-207ENST00000493271 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
SNRNP200-207ENST00000493271 DZIP3Q86Y13 1208 aaKnown RBP14.76□□□□□ -0.05
SNRNP200-207ENST00000493271 CCER1Q8TC90 406 aaPredicted RBP14.76□□□□□ -0.05
SNRNP200-207ENST00000493271 BCORQ6W2J9 1755 aa14.75□□□□□ -0.05
SNRNP200-207ENST00000493271 CCDC93Q567U6 631 aa14.75□□□□□ -0.05
SNRNP200-207ENST00000493271 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
SNRNP200-207ENST00000493271 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
SNRNP200-207ENST00000493271 A1BGP04217 495 aa14.74□□□□□ -0.05
SNRNP200-207ENST00000493271 NPR1P16066 1061 aa14.74□□□□□ -0.05
SNRNP200-207ENST00000493271 NBPF5PQ86XG9 351 aaPredicted RBP14.74□□□□□ -0.05
SNRNP200-207ENST00000493271 CFAP53Q96M91 514 aa14.74□□□□□ -0.05
SNRNP200-207ENST00000493271 ZNF219Q9P2Y4 722 aaPredicted RBP14.74□□□□□ -0.05
SNRNP200-207ENST00000493271 CAPN15O75808 1086 aa14.73□□□□□ -0.05
SNRNP200-207ENST00000493271 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
SNRNP200-207ENST00000493271 TPTE2Q6XPS3 522 aa14.73□□□□□ -0.05
SNRNP200-207ENST00000493271 SCN4AP35499 1836 aa14.73□□□□□ -0.05
SNRNP200-207ENST00000493271 KLRG2A4D1S0 409 aaPredicted RBP14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 SNRPA1P09661 255 aaKnown RBP14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 RTKN2Q8IZC4 609 aa14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 CCDC24Q8N4L8 307 aa14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 C7orf43Q8WVR3 580 aa14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 NUDCQ9Y266 331 aa14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
SNRNP200-207ENST00000493271 SLX4Q8IY92 1834 aa14.71□□□□□ -0.05
SNRNP200-207ENST00000493271 PASKQ96RG2 1323 aa14.71□□□□□ -0.05
SNRNP200-207ENST00000493271 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNRNP200-207ENST00000493271 TAF1DQ9H5J8 278 aaPredicted RBP14.71□□□□□ -0.05
SNRNP200-207ENST00000493271 HTATSF1O43719 755 aaKnown RBP14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 ALDH1B1P30837 517 aa14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 PRKAR2BP31323 418 aa14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 PRDM10Q9NQV6 1147 aa14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
SNRNP200-207ENST00000493271 HACL1Q9UJ83 578 aa14.69□□□□□ -0.06
SNRNP200-207ENST00000493271 CACNA1SQ13698 1873 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 TMEM88BA6NKF7 163 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 KCNQ3O43525 872 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 GRIPAP1Q4V328 841 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 CC2D2BQ6DHV5 1058 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 AIDAQ96BJ3 306 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 PHACTR3Q96KR7 559 aa14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 NIP7Q9Y221 180 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNRNP200-207ENST00000493271 CTCFP49711 727 aaPredicted RBP14.67□□□□□ -0.06
SNRNP200-207ENST00000493271 FZD9O00144 591 aa14.66□□□□□ -0.06
SNRNP200-207ENST00000493271 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
SNRNP200-207ENST00000493271 GTF2E1P29083 439 aaPredicted RBP14.66□□□□□ -0.06
SNRNP200-207ENST00000493271 GPC2Q8N158 579 aa14.66□□□□□ -0.06
SNRNP200-207ENST00000493271 PSMD1Q99460 953 aa14.66□□□□□ -0.06
SNRNP200-207ENST00000493271 NYXQ9GZU5 481 aa14.66□□□□□ -0.06
SNRNP200-207ENST00000493271 EPHX2P34913 555 aa14.65□□□□□ -0.06
SNRNP200-207ENST00000493271 IARSP41252 1262 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-207ENST00000493271 EAPPQ56P03 285 aaPredicted RBP14.65□□□□□ -0.06
SNRNP200-207ENST00000493271 JDP2Q8WYK2 163 aa14.65□□□□□ -0.06
SNRNP200-207ENST00000493271 FOXN1O15353 648 aa14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 TAF7Q15545 349 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 CRY2Q49AN0 593 aa14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 PNISRQ8TF01 805 aaKnown RBP14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 ZNF277Q9NRM2 450 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 ADAMTSL1Q8N6G6 1762 aa14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 RIC1Q4ADV7 1423 aa14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 ZNF541Q9H0D2 1346 aa14.64□□□□□ -0.07
SNRNP200-207ENST00000493271 IBTKQ9P2D0 1353 aaPredicted RBP14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 PRAMEF22A3QJZ6 481 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 RASSF10A6NK89 507 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 NBPF26B4DH59 902 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 ERVV-1B6SEH8 477 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 NEFMP07197 916 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 PIP4K2AP48426 406 aaPredicted RBP14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 VEGFBP49765 207 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 MCM10Q7L590 875 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
SNRNP200-207ENST00000493271 MAP2K1Q02750 393 aaPredicted RBP14.62□□□□□ -0.07
SNRNP200-207ENST00000493271 CNTROBQ8N137 903 aa14.62□□□□□ -0.07
SNRNP200-207ENST00000493271 SYNE4Q8N205 404 aa14.62□□□□□ -0.07
SNRNP200-207ENST00000493271 WBP1LQ9NX94 342 aa14.62□□□□□ -0.07
SNRNP200-207ENST00000493271 LAMB4A4D0S4 1761 aa14.62□□□□□ -0.07
SNRNP200-207ENST00000493271 SNED1Q8TER0 1413 aa14.61□□□□□ -0.07
SNRNP200-207ENST00000493271 LMOD1P29536 600 aaPredicted RBP14.61□□□□□ -0.07
SNRNP200-207ENST00000493271 EIF6P56537 245 aaKnown RBP14.61□□□□□ -0.07
SNRNP200-207ENST00000493271 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
SNRNP200-207ENST00000493271 DEFB115Q30KQ5 88 aa14.61□□□□□ -0.07
SNRNP200-207ENST00000493271 RNF123Q5XPI4 1314 aa14.61□□□□□ -0.07
SNRNP200-207ENST00000493271 HOXA10P31260 410 aaPredicted RBP14.6□□□□□ -0.07
SNRNP200-207ENST00000493271 HLFQ16534 295 aa14.6□□□□□ -0.07
SNRNP200-207ENST00000493271 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
SNRNP200-207ENST00000493271 RPGRQ92834 1020 aaKnown RBP14.6□□□□□ -0.07
SNRNP200-207ENST00000493271 MAP3K15Q6ZN16 1313 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms