RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 LOC102724428A0A0B4J2F2 783 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 PI4KAP2A4QPH2 592 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 SIK1P57059 783 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 AAMPQ13685 434 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 FAM196AQ6ZSG2 479 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 PI4KAP1Q8N8J0 262 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 SRCIN1Q9C0H9 1055 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 MAP3K2Q9Y2U5 619 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
FDPS-218ENST00000492887 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
FDPS-218ENST00000492887 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
FDPS-218ENST00000492887 KSR2Q6VAB6 950 aa10.11□□□□□ -0.79
FDPS-218ENST00000492887 SPEF2Q9C093 1822 aa10.11□□□□□ -0.79
FDPS-218ENST00000492887 SCN7AQ01118 1682 aa10.11□□□□□ -0.79
FDPS-218ENST00000492887 ADCY9O60503 1353 aa10.11□□□□□ -0.79
FDPS-218ENST00000492887 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
FDPS-218ENST00000492887 TRIM37O94972 964 aa10.1□□□□□ -0.79
FDPS-218ENST00000492887 PDIA6Q15084 440 aa10.1□□□□□ -0.79
FDPS-218ENST00000492887 INTS3Q68E01 1043 aaKnown RBP10.1□□□□□ -0.79
FDPS-218ENST00000492887 MYD88Q99836 296 aa10.1□□□□□ -0.79
FDPS-218ENST00000492887 ZBTB3Q9H5J0 574 aa10.1□□□□□ -0.79
FDPS-218ENST00000492887 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
FDPS-218ENST00000492887 RGPD3A6NKT7 1758 aaPredicted RBP10.1□□□□□ -0.79
FDPS-218ENST00000492887 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
FDPS-218ENST00000492887 ATP10DQ9P241 1426 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
FDPS-218ENST00000492887 CYP19A1P11511 503 aaPredicted RBP10.09□□□□□ -0.79
FDPS-218ENST00000492887 NBPF14Q5TI25 921 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 NBPF10Q6P3W6 841 aaKnown RBP10.09□□□□□ -0.79
FDPS-218ENST00000492887 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
FDPS-218ENST00000492887 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 MEIS3Q99687 375 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 RWDD1Q9H446 243 aaPredicted RBP10.09□□□□□ -0.79
FDPS-218ENST00000492887 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 C9orf78Q9NZ63 289 aaPredicted RBP10.09□□□□□ -0.79
FDPS-218ENST00000492887 ZBTB1Q9Y2K1 713 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 LAMB2P55268 1798 aa10.09□□□□□ -0.79
FDPS-218ENST00000492887 GNAI3P08754 354 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 CRKLP46109 303 aaKnown RBP10.08□□□□□ -0.8
FDPS-218ENST00000492887 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 PTF1AQ7RTS3 328 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 PLBD2Q8NHP8 589 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
FDPS-218ENST00000492887 BCL11BQ9C0K0 894 aaPredicted RBP10.08□□□□□ -0.8
FDPS-218ENST00000492887 COL15A1P39059 1388 aa10.07□□□□□ -0.8
FDPS-218ENST00000492887 ZBTB7BO15156 539 aaPredicted RBP10.07□□□□□ -0.8
FDPS-218ENST00000492887 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
FDPS-218ENST00000492887 GNAI2P04899 355 aa10.07□□□□□ -0.8
FDPS-218ENST00000492887 KCNQ4P56696 695 aa10.07□□□□□ -0.8
FDPS-218ENST00000492887 ITPK1Q13572 414 aa10.07□□□□□ -0.8
FDPS-218ENST00000492887 DZIP3Q86Y13 1208 aaKnown RBP10.07□□□□□ -0.8
FDPS-218ENST00000492887 METTL22Q9BUU2 404 aaPredicted RBP10.07□□□□□ -0.8
FDPS-218ENST00000492887 ZBTB40Q9NUA8 1239 aa10.07□□□□□ -0.8
FDPS-218ENST00000492887 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
FDPS-218ENST00000492887 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
FDPS-218ENST00000492887 CWF19L2Q2TBE0 894 aaKnown RBP10.06□□□□□ -0.8
FDPS-218ENST00000492887 BEND3Q5T5X7 828 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 LINC00116Q8NCU8 138 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 AK7Q96M32 723 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 RGS17Q9UGC6 210 aaPredicted RBP10.06□□□□□ -0.8
FDPS-218ENST00000492887 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 MAP3K15Q6ZN16 1313 aa10.06□□□□□ -0.8
FDPS-218ENST00000492887 A0A087WZG4 1122 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 HMMRO75330 724 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 HSP90AB3PQ58FF7 597 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 BCL11AQ9H165 835 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
FDPS-218ENST00000492887 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
FDPS-218ENST00000492887 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
FDPS-218ENST00000492887 CACNA1SQ13698 1873 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 GNPATO15228 680 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 PHF14O94880 888 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 APBA3O96018 575 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
FDPS-218ENST00000492887 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
FDPS-218ENST00000492887 CWC25Q9NXE8 425 aaPredicted RBP10.04□□□□□ -0.8
FDPS-218ENST00000492887 CHMP3Q9Y3E7 222 aa10.04□□□□□ -0.8
FDPS-218ENST00000492887 GRM8O00222 908 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 IGHDP01880 384 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 GPTP24298 496 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 COL24A1Q17RW2 1714 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 CEP85Q6P2H3 762 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 INTS5Q6P9B9 1019 aaKnown RBP10.03□□□□□ -0.8
FDPS-218ENST00000492887 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
FDPS-218ENST00000492887 ZNF652Q9Y2D9 606 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 RTCBQ9Y3I0 505 aaKnown RBP10.03□□□□□ -0.8
FDPS-218ENST00000492887 KDM2BQ8NHM5 1336 aa10.03□□□□□ -0.8
FDPS-218ENST00000492887 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
FDPS-218ENST00000492887 APBB1O00213 710 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms