RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 DDR1Q08345 913 aa13.3□□□□□ -0.28
TNFRSF9-203ENST00000492571 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
TNFRSF9-203ENST00000492571 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
TNFRSF9-203ENST00000492571 H0YIN7 160 aa13.29□□□□□ -0.28
TNFRSF9-203ENST00000492571 PRELPP51888 382 aa13.29□□□□□ -0.28
TNFRSF9-203ENST00000492571 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
TNFRSF9-203ENST00000492571 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
TNFRSF9-203ENST00000492571 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
TNFRSF9-203ENST00000492571 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
TNFRSF9-203ENST00000492571 N4BP2Q86UW6 1770 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF9-203ENST00000492571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF9-203ENST00000492571 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
TNFRSF9-203ENST00000492571 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF9-203ENST00000492571 KIF13BQ9NQT8 1826 aa13.27□□□□□ -0.28
TNFRSF9-203ENST00000492571 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
TNFRSF9-203ENST00000492571 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
TNFRSF9-203ENST00000492571 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
TNFRSF9-203ENST00000492571 KDM6AO15550 1401 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 SERPINB2P05120 415 aa13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 HSPA1AP0DMV8 641 aaKnown RBP13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 HSPA1BP0DMV9 641 aaKnown RBP13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 RASSF7Q02833 373 aa13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 C2CD5Q86YS7 1000 aa13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
TNFRSF9-203ENST00000492571 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
TNFRSF9-203ENST00000492571 NFIXQ14938 502 aa13.25□□□□□ -0.29
TNFRSF9-203ENST00000492571 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
TNFRSF9-203ENST00000492571 PANK3Q9H999 370 aa13.25□□□□□ -0.29
TNFRSF9-203ENST00000492571 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
TNFRSF9-203ENST00000492571 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
TNFRSF9-203ENST00000492571 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
TNFRSF9-203ENST00000492571 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF9-203ENST00000492571 A0A087WZG4 1122 aa13.24□□□□□ -0.29
TNFRSF9-203ENST00000492571 NPHP1O15259 732 aa13.24□□□□□ -0.29
TNFRSF9-203ENST00000492571 STARD3NLO95772 234 aa13.24□□□□□ -0.29
TNFRSF9-203ENST00000492571 SNPHO15079 494 aa13.23□□□□□ -0.29
TNFRSF9-203ENST00000492571 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF9-203ENST00000492571 PDE6BP35913 854 aa13.23□□□□□ -0.29
TNFRSF9-203ENST00000492571 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFRSF9-203ENST00000492571 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
TNFRSF9-203ENST00000492571 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 PCNTO95613 3336 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
TNFRSF9-203ENST00000492571 COL15A1P39059 1388 aa13.21□□□□□ -0.29
TNFRSF9-203ENST00000492571 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
TNFRSF9-203ENST00000492571 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
TNFRSF9-203ENST00000492571 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
TNFRSF9-203ENST00000492571 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
TNFRSF9-203ENST00000492571 IL13P35225 146 aa13.2□□□□□ -0.3
TNFRSF9-203ENST00000492571 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
TNFRSF9-203ENST00000492571 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF9-203ENST00000492571 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
TNFRSF9-203ENST00000492571 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
TNFRSF9-203ENST00000492571 C21orf2O43822 256 aa13.19□□□□□ -0.3
TNFRSF9-203ENST00000492571 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
TNFRSF9-203ENST00000492571 AIDAQ96BJ3 306 aa13.19□□□□□ -0.3
TNFRSF9-203ENST00000492571 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF9-203ENST00000492571 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF9-203ENST00000492571 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF9-203ENST00000492571 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 NFKBIEO00221 500 aa13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
TNFRSF9-203ENST00000492571 G3V3G9 751 aa13.17□□□□□ -0.3
TNFRSF9-203ENST00000492571 HMOX1P09601 288 aa13.17□□□□□ -0.3
TNFRSF9-203ENST00000492571 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
TNFRSF9-203ENST00000492571 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
TNFRSF9-203ENST00000492571 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
TNFRSF9-203ENST00000492571 BRCA1P38398 1863 aaKnown RBP13.16□□□□□ -0.3
TNFRSF9-203ENST00000492571 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
TNFRSF9-203ENST00000492571 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
TNFRSF9-203ENST00000492571 ST5P78524 1137 aa13.16□□□□□ -0.3
TNFRSF9-203ENST00000492571 TEFQ10587 303 aa13.16□□□□□ -0.3
TNFRSF9-203ENST00000492571 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF9-203ENST00000492571 POTECB2RU33 542 aa13.15□□□□□ -0.3
TNFRSF9-203ENST00000492571 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
TNFRSF9-203ENST00000492571 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
TNFRSF9-203ENST00000492571 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 HSPA5P11021 654 aaKnown RBP13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
TNFRSF9-203ENST00000492571 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 CTCFP49711 727 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms