RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 TRIM37O94972 964 aa17.31■□□□□ 0.36
PTPRE-210ENST00000492479 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
PTPRE-210ENST00000492479 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
PTPRE-210ENST00000492479 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
PTPRE-210ENST00000492479 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
PTPRE-210ENST00000492479 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
PTPRE-210ENST00000492479 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
PTPRE-210ENST00000492479 MAP3K2Q9Y2U5 619 aa17.3■□□□□ 0.36
PTPRE-210ENST00000492479 ANKRD36CQ5JPF3 1778 aa17.3■□□□□ 0.36
PTPRE-210ENST00000492479 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
PTPRE-210ENST00000492479 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
PTPRE-210ENST00000492479 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
PTPRE-210ENST00000492479 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
PTPRE-210ENST00000492479 UBR3Q6ZT12 1888 aa17.28■□□□□ 0.36
PTPRE-210ENST00000492479 NUP98P52948 1817 aa17.28■□□□□ 0.36
PTPRE-210ENST00000492479 UTYO14607 1347 aa17.27■□□□□ 0.36
PTPRE-210ENST00000492479 MAP3K15Q6ZN16 1313 aa17.27■□□□□ 0.36
PTPRE-210ENST00000492479 TRIM28Q13263 835 aaKnown RBP17.27■□□□□ 0.36
PTPRE-210ENST00000492479 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
PTPRE-210ENST00000492479 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
PTPRE-210ENST00000492479 COL15A1P39059 1388 aa17.27■□□□□ 0.35
PTPRE-210ENST00000492479 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
PTPRE-210ENST00000492479 A0A087WZG4 1122 aa17.26■□□□□ 0.35
PTPRE-210ENST00000492479 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
PTPRE-210ENST00000492479 AIMP1Q12904 312 aaKnown RBP17.26■□□□□ 0.35
PTPRE-210ENST00000492479 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
PTPRE-210ENST00000492479 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
PTPRE-210ENST00000492479 IGKV5-2P06315 115 aa17.25■□□□□ 0.35
PTPRE-210ENST00000492479 GNAI3P08754 354 aa17.25■□□□□ 0.35
PTPRE-210ENST00000492479 NEXNQ0ZGT2 675 aa17.25■□□□□ 0.35
PTPRE-210ENST00000492479 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
PTPRE-210ENST00000492479 PROM2Q8N271 834 aa17.25■□□□□ 0.35
PTPRE-210ENST00000492479 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
PTPRE-210ENST00000492479 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
PTPRE-210ENST00000492479 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
PTPRE-210ENST00000492479 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
PTPRE-210ENST00000492479 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
PTPRE-210ENST00000492479 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
PTPRE-210ENST00000492479 ADRA2BP18089 450 aa17.23■□□□□ 0.35
PTPRE-210ENST00000492479 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
PTPRE-210ENST00000492479 MEIS3Q99687 375 aa17.23■□□□□ 0.35
PTPRE-210ENST00000492479 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
PTPRE-210ENST00000492479 KDM2BQ8NHM5 1336 aa17.22■□□□□ 0.35
PTPRE-210ENST00000492479 APBA3O96018 575 aa17.22■□□□□ 0.35
PTPRE-210ENST00000492479 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
PTPRE-210ENST00000492479 HDAC1Q13547 482 aaPredicted RBP17.22■□□□□ 0.35
PTPRE-210ENST00000492479 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
PTPRE-210ENST00000492479 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
PTPRE-210ENST00000492479 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
PTPRE-210ENST00000492479 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
PTPRE-210ENST00000492479 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
PTPRE-210ENST00000492479 GCKRQ14397 625 aa17.21■□□□□ 0.35
PTPRE-210ENST00000492479 CLEC4GQ6UXB4 293 aa17.21■□□□□ 0.35
PTPRE-210ENST00000492479 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
PTPRE-210ENST00000492479 MYD88Q99836 296 aa17.21■□□□□ 0.35
PTPRE-210ENST00000492479 GRM8O00222 908 aa17.2■□□□□ 0.34
PTPRE-210ENST00000492479 GNAI2P04899 355 aa17.2■□□□□ 0.34
PTPRE-210ENST00000492479 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
PTPRE-210ENST00000492479 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
PTPRE-210ENST00000492479 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
PTPRE-210ENST00000492479 ZBTB3Q9H5J0 574 aa17.2■□□□□ 0.34
PTPRE-210ENST00000492479 KCNQ4P56696 695 aa17.19■□□□□ 0.34
PTPRE-210ENST00000492479 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
PTPRE-210ENST00000492479 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
PTPRE-210ENST00000492479 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
PTPRE-210ENST00000492479 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
PTPRE-210ENST00000492479 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
PTPRE-210ENST00000492479 COL24A1Q17RW2 1714 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 GNPATO15228 680 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
PTPRE-210ENST00000492479 SSFA2P28290 1259 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 CASP7P55210 303 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 MTX1Q13505 466 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
PTPRE-210ENST00000492479 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
PTPRE-210ENST00000492479 TUBGCP6Q96RT7 1819 aa17.18■□□□□ 0.34
PTPRE-210ENST00000492479 H7C1W4 665 aa17.17■□□□□ 0.34
PTPRE-210ENST00000492479 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
PTPRE-210ENST00000492479 HLFQ16534 295 aa17.17■□□□□ 0.34
PTPRE-210ENST00000492479 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
PTPRE-210ENST00000492479 AK7Q96M32 723 aa17.17■□□□□ 0.34
PTPRE-210ENST00000492479 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
PTPRE-210ENST00000492479 TBC1D2BQ9UPU7 963 aa17.17■□□□□ 0.34
PTPRE-210ENST00000492479 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
PTPRE-210ENST00000492479 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
PTPRE-210ENST00000492479 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
PTPRE-210ENST00000492479 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
PTPRE-210ENST00000492479 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
PTPRE-210ENST00000492479 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
PTPRE-210ENST00000492479 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
PTPRE-210ENST00000492479 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
PTPRE-210ENST00000492479 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
PTPRE-210ENST00000492479 LAMB2P55268 1798 aa17.15■□□□□ 0.34
PTPRE-210ENST00000492479 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
PTPRE-210ENST00000492479 IGHDP01880 384 aa17.14■□□□□ 0.33
PTPRE-210ENST00000492479 PCCAP05165 728 aaPredicted RBP17.14■□□□□ 0.33
PTPRE-210ENST00000492479 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms