RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 SLX4Q8IY92 1834 aa21.29■■□□□ 1
CDK11A-220ENST00000492390 EPHX2P34913 555 aa21.28■■□□□ 1
CDK11A-220ENST00000492390 CNTROBQ8N137 903 aa21.28■■□□□ 1
CDK11A-220ENST00000492390 CCDC85CA6NKD9 419 aa21.27■■□□□ 1
CDK11A-220ENST00000492390 NPHP1O15259 732 aa21.27■■□□□ 1
CDK11A-220ENST00000492390 ST5P78524 1137 aa21.27■■□□□ 1
CDK11A-220ENST00000492390 CCDC93Q567U6 631 aa21.27■■□□□ 1
CDK11A-220ENST00000492390 C7orf43Q8WVR3 580 aa21.27■■□□□ 1
CDK11A-220ENST00000492390 SETDB2Q96T68 719 aa21.27■■□□□ 1
CDK11A-220ENST00000492390 MORC1Q86VD1 984 aa21.26■□□□□ 0.99
CDK11A-220ENST00000492390 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
CDK11A-220ENST00000492390 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
CDK11A-220ENST00000492390 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
CDK11A-220ENST00000492390 IL6STP40189 918 aaPredicted RBP21.25■□□□□ 0.99
CDK11A-220ENST00000492390 MAP1SQ66K74 1059 aaPredicted RBP21.25■□□□□ 0.99
CDK11A-220ENST00000492390 TTC5Q8N0Z6 440 aa21.25■□□□□ 0.99
CDK11A-220ENST00000492390 TEX13AQ9BXU3 409 aaPredicted RBP21.25■□□□□ 0.99
CDK11A-220ENST00000492390 ABT1Q9ULW3 272 aaKnown RBP21.25■□□□□ 0.99
CDK11A-220ENST00000492390 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
CDK11A-220ENST00000492390 ZNF541Q9H0D2 1346 aa21.25■□□□□ 0.99
CDK11A-220ENST00000492390 SCN7AQ01118 1682 aa21.24■□□□□ 0.99
CDK11A-220ENST00000492390 ARFGEF2Q9Y6D5 1785 aa21.24■□□□□ 0.99
CDK11A-220ENST00000492390 FKBP4Q02790 459 aaKnown RBP eCLIP21.24■□□□□ 0.99
CDK11A-220ENST00000492390 BEGAINQ9BUH8 593 aa21.24■□□□□ 0.99
CDK11A-220ENST00000492390 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
CDK11A-220ENST00000492390 PANK3Q9H999 370 aa21.23■□□□□ 0.99
CDK11A-220ENST00000492390 ZNF330Q9Y3S2 320 aaPredicted RBP21.23■□□□□ 0.99
CDK11A-220ENST00000492390 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
CDK11A-220ENST00000492390 CAMTA2O94983 1202 aa21.21■□□□□ 0.99
CDK11A-220ENST00000492390 ECE1P42892 770 aa21.21■□□□□ 0.99
CDK11A-220ENST00000492390 DDX21Q9NR30 783 aaKnown RBP eCLIP21.21■□□□□ 0.99
CDK11A-220ENST00000492390 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
CDK11A-220ENST00000492390 CACNA1SQ13698 1873 aa21.21■□□□□ 0.99
CDK11A-220ENST00000492390 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
CDK11A-220ENST00000492390 FZD9O00144 591 aa21.2■□□□□ 0.98
CDK11A-220ENST00000492390 NPR1P16066 1061 aa21.2■□□□□ 0.98
CDK11A-220ENST00000492390 MTHFSDQ2M296 383 aaKnown RBP21.2■□□□□ 0.98
CDK11A-220ENST00000492390 RTKN2Q8IZC4 609 aa21.2■□□□□ 0.98
CDK11A-220ENST00000492390 ZNF496Q96IT1 587 aaPredicted RBP21.2■□□□□ 0.98
CDK11A-220ENST00000492390 CAPNS2Q96L46 248 aa21.2■□□□□ 0.98
CDK11A-220ENST00000492390 HEG1Q9ULI3 1381 aa21.2■□□□□ 0.98
CDK11A-220ENST00000492390 GPC2Q8N158 579 aa21.19■□□□□ 0.98
CDK11A-220ENST00000492390 THSD7BQ9C0I4 1608 aa21.18■□□□□ 0.98
CDK11A-220ENST00000492390 GPR101Q96P66 508 aaPredicted RBP21.18■□□□□ 0.98
CDK11A-220ENST00000492390 KLRG2A4D1S0 409 aaPredicted RBP21.17■□□□□ 0.98
CDK11A-220ENST00000492390 HMOX1P09601 288 aa21.17■□□□□ 0.98
CDK11A-220ENST00000492390 ZNF790Q6PG37 636 aa21.17■□□□□ 0.98
CDK11A-220ENST00000492390 IARSP41252 1262 aaKnown RBP21.16■□□□□ 0.98
CDK11A-220ENST00000492390 PAXIP1Q6ZW49 1069 aaPredicted RBP21.16■□□□□ 0.98
CDK11A-220ENST00000492390 NBPF5PQ86XG9 351 aaPredicted RBP21.16■□□□□ 0.98
CDK11A-220ENST00000492390 A1BGP04217 495 aa21.15■□□□□ 0.98
CDK11A-220ENST00000492390 CLEC4GQ6UXB4 293 aa21.15■□□□□ 0.98
CDK11A-220ENST00000492390 DZIP3Q86Y13 1208 aaKnown RBP21.15■□□□□ 0.98
CDK11A-220ENST00000492390 MAP2K2P36507 400 aa21.14■□□□□ 0.97
CDK11A-220ENST00000492390 TEFQ10587 303 aa21.14■□□□□ 0.97
CDK11A-220ENST00000492390 CYP4F22Q6NT55 531 aa21.14■□□□□ 0.97
CDK11A-220ENST00000492390 SYNE4Q8N205 404 aa21.14■□□□□ 0.97
CDK11A-220ENST00000492390 JDP2Q8WYK2 163 aa21.14■□□□□ 0.97
CDK11A-220ENST00000492390 OLFM4Q6UX06 510 aa21.13■□□□□ 0.97
CDK11A-220ENST00000492390 FMNL2Q96PY5 1086 aa21.13■□□□□ 0.97
CDK11A-220ENST00000492390 CA12O43570 354 aa21.12■□□□□ 0.97
CDK11A-220ENST00000492390 LMOD1P29536 600 aaPredicted RBP21.12■□□□□ 0.97
CDK11A-220ENST00000492390 ALDH1B1P30837 517 aa21.12■□□□□ 0.97
CDK11A-220ENST00000492390 GRM1Q13255 1194 aa21.12■□□□□ 0.97
CDK11A-220ENST00000492390 TPTE2Q6XPS3 522 aa21.12■□□□□ 0.97
CDK11A-220ENST00000492390 EIF6P56537 245 aaKnown RBP21.11■□□□□ 0.97
CDK11A-220ENST00000492390 CFAP44Q96MT7 982 aa21.11■□□□□ 0.97
CDK11A-220ENST00000492390 PSMD1Q99460 953 aa21.11■□□□□ 0.97
CDK11A-220ENST00000492390 MCOLN1Q9GZU1 580 aa21.11■□□□□ 0.97
CDK11A-220ENST00000492390 ZNF652Q9Y2D9 606 aa21.11■□□□□ 0.97
CDK11A-220ENST00000492390 KNSTRNQ9Y448 316 aa21.11■□□□□ 0.97
CDK11A-220ENST00000492390 TLL2Q9Y6L7 1015 aa21.11■□□□□ 0.97
CDK11A-220ENST00000492390 BCORQ6W2J9 1755 aa21.1■□□□□ 0.97
CDK11A-220ENST00000492390 CST9Q5W186 159 aa21.1■□□□□ 0.97
CDK11A-220ENST00000492390 IL17REQ8NFR9 667 aa21.1■□□□□ 0.97
CDK11A-220ENST00000492390 TSKSQ9UJT2 592 aa21.1■□□□□ 0.97
CDK11A-220ENST00000492390 FMR1Q06787 632 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDK11A-220ENST00000492390 GJA3Q9Y6H8 435 aa21.09■□□□□ 0.97
CDK11A-220ENST00000492390 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
CDK11A-220ENST00000492390 RGL2O15211 777 aa21.08■□□□□ 0.97
CDK11A-220ENST00000492390 USP50Q70EL3 339 aaPredicted RBP21.08■□□□□ 0.97
CDK11A-220ENST00000492390 SCNN1DP51172 638 aa21.07■□□□□ 0.96
CDK11A-220ENST00000492390 CC2D2BQ6DHV5 1058 aa21.07■□□□□ 0.96
CDK11A-220ENST00000492390 SNED1Q8TER0 1413 aa21.06■□□□□ 0.96
CDK11A-220ENST00000492390 TRAF5O00463 557 aa21.06■□□□□ 0.96
CDK11A-220ENST00000492390 DIAPH1O60610 1272 aaKnown RBP21.06■□□□□ 0.96
CDK11A-220ENST00000492390 AOC2O75106 756 aa21.06■□□□□ 0.96
CDK11A-220ENST00000492390 EPS15P42566 896 aa21.06■□□□□ 0.96
CDK11A-220ENST00000492390 TRPM7Q96QT4 1865 aa21.05■□□□□ 0.96
CDK11A-220ENST00000492390 LTBP1Q14766 1721 aa21.05■□□□□ 0.96
CDK11A-220ENST00000492390 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
CDK11A-220ENST00000492390 HHIPL1Q96JK4 782 aa21.05■□□□□ 0.96
CDK11A-220ENST00000492390 NIP7Q9Y221 180 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDK11A-220ENST00000492390 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
CDK11A-220ENST00000492390 PDE4DIPQ5VU43 2346 aa21.04■□□□□ 0.96
CDK11A-220ENST00000492390 BRPF1P55201 1214 aaPredicted RBP21.04■□□□□ 0.96
CDK11A-220ENST00000492390 DGKZQ13574 1117 aa21.04■□□□□ 0.96
CDK11A-220ENST00000492390 GRIPAP1Q4V328 841 aa21.04■□□□□ 0.96
CDK11A-220ENST00000492390 SAPCD2Q86UD0 394 aa21.04■□□□□ 0.96
CDK11A-220ENST00000492390 SIPA1L3O60292 1781 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms