RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 UBE3BQ7Z3V4 1068 aa18.19■□□□□ 0.5
TNFRSF1B-203ENST00000492361 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
TNFRSF1B-203ENST00000492361 BRD1O95696 1058 aa18.19■□□□□ 0.5
TNFRSF1B-203ENST00000492361 HSP90AB4PQ58FF6 505 aa18.19■□□□□ 0.5
TNFRSF1B-203ENST00000492361 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
TNFRSF1B-203ENST00000492361 RBM8AQ9Y5S9 174 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1B-203ENST00000492361 SGSM2O43147 1006 aa18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 PHF14O94880 888 aa18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 SLFNL1Q499Z3 407 aa18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 DDX46Q7L014 1031 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CRB1P82279 1406 aa18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 STK11IPQ8N1F8 1099 aa18.18■□□□□ 0.5
TNFRSF1B-203ENST00000492361 DDX58O95786 925 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 RUFY3Q7L099 469 aa18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 GCP02774 474 aa18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ZNF445P59923 1031 aa18.17■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ADCY5O95622 1261 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 KAT6BQ8WYB5 2073 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 BLOC1S2Q6QNY1 142 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 RGS12O14924 1447 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 BEND3Q5T5X7 828 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CCDC39Q9UFE4 941 aa18.16■□□□□ 0.5
TNFRSF1B-203ENST00000492361 SNRKQ9NRH2 765 aa18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 HSPA4P34932 840 aa18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CCT2P78371 535 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ZNF592Q92610 1267 aa18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1B-203ENST00000492361 HSP90AB3PQ58FF7 597 aa18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 SEC62Q99442 399 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TBX22Q9Y458 520 aa18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 PI4K2BQ8TCG2 481 aa18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 IP6K1Q92551 441 aa18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1B-203ENST00000492361 GRM8O00222 908 aa18.13■□□□□ 0.49
TNFRSF1B-203ENST00000492361 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1B-203ENST00000492361 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
TNFRSF1B-203ENST00000492361 ARHGEF10O15013 1369 aa18.13■□□□□ 0.49
TNFRSF1B-203ENST00000492361 A0A087WWV3 80 aa18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 PRDM10Q9NQV6 1147 aa18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.12■□□□□ 0.495e-6■■□□□ 14
TNFRSF1B-203ENST00000492361 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 A0A087WZG4 1122 aa18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
TNFRSF1B-203ENST00000492361 A0A0D9SFI3 127 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 F13A1P00488 732 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 ME3Q16798 604 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 AXIN2Q9Y2T1 843 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 RAD50Q92878 1312 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 ERCC4Q92889 916 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 LSG1Q9H089 658 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
TNFRSF1B-203ENST00000492361 KRT28Q7Z3Y7 464 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 PPP1R9BQ96SB3 815 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 ZKSCAN5Q9Y2L8 839 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 ANAPC15P60006 121 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 USP32Q8NFA0 1604 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 JAK2O60674 1132 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 HAND2P61296 217 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
TNFRSF1B-203ENST00000492361 AKAP4Q5JQC9 854 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TIMM10P62072 90 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 SPATA32Q96LK8 384 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 GOLIM4O00461 696 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TFCP2Q12800 502 aa18.09■□□□□ 0.49
TNFRSF1B-203ENST00000492361 TPCN1Q9ULQ1 816 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms