RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 HDGFP51858 240 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 RHBDL3P58872 404 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 MVPQ14764 893 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 ZKSCAN2Q63HK3 967 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 CLEC4GQ6UXB4 293 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 FILIP1Q7Z7B0 1213 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 SLC43A3Q8NBI5 491 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 TMC2Q8TDI7 906 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 STK32AQ8WU08 396 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 UCN2Q96RP3 112 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 RPS6KC1Q96S38 1066 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 ALG2Q9H553 416 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 FAM217BQ9NTX9 383 aaPredicted RBP4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 CABP1Q9NZU7 370 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 POLKQ9UBT6 870 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 LIMD1Q9UGP4 676 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 PCDHB15Q9Y5E8 787 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 COMMD10Q9Y6G5 202 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 NDUFB9Q9Y6M9 179 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 RPS6KL1Q9Y6S9 549 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 PPIP5K1Q6PFW1 1433 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 MYO5BQ9ULV0 1848 aa4.69□□□□□ -1.66
ATPAF1-206ENST00000492233 TNRQ92752 1358 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 S100BP04271 92 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 LIG1P18858 919 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 HSD3B2P26439 372 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 IL13P35225 146 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 DEKP35659 375 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 RGS3P49796 1198 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 EXOSC9Q06265 439 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 RAD51AP2Q09MP3 1159 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 ELOAQ14241 798 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 DIXDC1Q155Q3 683 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 ALDH1L2Q3SY69 923 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 C4orf46Q504U0 113 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 WAPLQ7Z5K2 1190 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 C11orf96Q7Z7L8 435 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 FMNL3Q8IVF7 1028 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 DZIP1LQ8IYY4 767 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 FRAT1Q92837 279 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 L3MBTL3Q96JM7 780 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 TINF2Q9BSI4 451 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 IRF2BPLQ9H1B7 796 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 TMX4Q9H1E5 349 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 RWDD1Q9H446 243 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 PCDH12Q9NPG4 1184 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 GNL3LQ9NVN8 582 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 IFT57Q9NWB7 429 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 NLRP2Q9NX02 1062 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 DMGDHQ9UI17 866 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 PRR12Q9ULL5 1215 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 TNNQ9UQP3 1299 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 USP19O94966 1318 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 NRXN3Q9Y4C0 1643 aa4.68□□□□□ -1.66
ATPAF1-206ENST00000492233 CPS1P31327 1500 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 METP08581 1390 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 DNAJA1P31689 397 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 RIPK4P57078 832 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 PTGDRQ13258 359 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 HDAC1Q13547 482 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 NFE2L2Q16236 605 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 EAPPQ56P03 285 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 ATF7IPQ6VMQ6 1270 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 TBC1D9Q6ZT07 1266 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 RIC3Q7Z5B4 369 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 NT5DC4Q86YG4 428 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 SSH1Q8WYL5 1049 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 TSR2Q969E8 191 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 ARMC5Q96C12 935 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 CCSER2Q9H7U1 834 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 SMC4Q9NTJ3 1288 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 ZMIZ1Q9ULJ6 1067 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 DDX19BQ9UMR2 479 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 NOVA2Q9UNW9 492 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 PDZRN3Q9UPQ7 1066 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 CCDC61Q9Y6R9 512 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 CDK12Q9NYV4 1490 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 KIF16BQ96L93 1317 aa4.67□□□□□ -1.66
ATPAF1-206ENST00000492233 PIK3R4Q99570 1358 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 TMEM2Q9UHN6 1383 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 KNDC1Q76NI1 1749 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 ADAMTS13Q76LX8 1427 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 IPO8O15397 1037 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PRC1O43663 620 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 LZTS3O60299 673 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 USP17L8P0C7I0 530 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 ZNF853P0CG23 659 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 TRIM27P14373 513 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PRKAR2BP31323 418 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 CALD1Q05682 793 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 GNL2Q13823 731 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 MYBPC2Q14324 1141 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 CSPP1Q1MSJ5 1256 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 SOGA3Q5TF21 947 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 ZNF746Q6NUN9 644 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PPP1R18Q6NYC8 613 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 JAZF1Q86VZ6 243 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 FTSJ3Q8IY81 847 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 TMEM87AQ8NBN3 555 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PRR7Q8TB68 274 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms