RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
SNED1-211ENST00000491761 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 H3BQV1 296 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 ZNF445P59923 1031 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
SNED1-211ENST00000491761 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
SNED1-211ENST00000491761 MAP3K2Q9Y2U5 619 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
SNED1-211ENST00000491761 PALD1Q9ULE6 856 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 G3V3G9 751 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
SNED1-211ENST00000491761 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
SNED1-211ENST00000491761 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 SYCE3A1L190 88 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 AACSQ86V21 672 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
SNED1-211ENST00000491761 ECHDC1Q9NTX5 307 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 HIP1O00291 1037 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 SPC24Q8NBT2 197 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 ZSCAN30Q86W11 494 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
SNED1-211ENST00000491761 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
SNED1-211ENST00000491761 RNMTO43148 476 aaKnown RBP12.83□□□□□ -0.36
SNED1-211ENST00000491761 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
SNED1-211ENST00000491761 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
SNED1-211ENST00000491761 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 KCNQ3O43525 872 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 GCP02774 474 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
SNED1-211ENST00000491761 SGSM2O43147 1006 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 FIBPO43427 364 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 HSPA4P34932 840 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 PRDM10Q9NQV6 1147 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
SNED1-211ENST00000491761 RNF20Q5VTR2 975 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 BRD1O95696 1058 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
SNED1-211ENST00000491761 POLA2Q14181 598 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 LRSAM1Q6UWE0 723 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 JAKMIP1Q96N16 626 aaKnown RBP12.82□□□□□ -0.36
SNED1-211ENST00000491761 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
SNED1-211ENST00000491761 CUL4AQ13619 759 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
SNED1-211ENST00000491761 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 RAD50Q92878 1312 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 KDM4AO75164 1064 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 PSMA5P28066 241 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
SNED1-211ENST00000491761 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
SNED1-211ENST00000491761 ARHGAP23Q9P227 1491 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
SNED1-211ENST00000491761 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
SNED1-211ENST00000491761 SLIT1O75093 1534 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 SIL1Q9H173 461 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
SNED1-211ENST00000491761 MYL6BP14649 208 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 GPT2Q8TD30 523 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
SNED1-211ENST00000491761 ZDHHC9Q9Y397 364 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 SNX14Q9Y5W7 946 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 GRM8O00222 908 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
SNED1-211ENST00000491761 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
SNED1-211ENST00000491761 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
SNED1-211ENST00000491761 LETM1O95202 739 aaPredicted RBP12.79□□□□□ -0.36
SNED1-211ENST00000491761 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
SNED1-211ENST00000491761 AK2P54819 239 aa12.78□□□□□ -0.36
SNED1-211ENST00000491761 PI4K2BQ8TCG2 481 aa12.78□□□□□ -0.36
SNED1-211ENST00000491761 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
SNED1-211ENST00000491761 SH2B1Q9NRF2 756 aaPredicted RBP12.78□□□□□ -0.36
SNED1-211ENST00000491761 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
SNED1-211ENST00000491761 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
SNED1-211ENST00000491761 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
SNED1-211ENST00000491761 ORAI2Q96SN7 254 aa12.78□□□□□ -0.36
SNED1-211ENST00000491761 TOPAZ1Q8N9V7 1692 aa12.78□□□□□ -0.36
SNED1-211ENST00000491761 STX6O43752 255 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms