RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FAM200AQ8TCP9 573 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 BHMTQ93088 406 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 PPP1R12CQ9BZL4 782 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 PHACTR1Q9C0D0 580 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 USP3Q9Y6I4 520 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 SHISA8B8ZZ34 492 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 IGHA1P01876 353 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 ARAFP10398 606 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 ATP4AP20648 1035 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 FOXK2Q01167 660 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 SFSWAPQ12872 951 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 RAB44Q7Z6P3 723 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 SYT9Q86SS6 491 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 PLEKHM2Q8IWE5 1019 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 ALDH16A1Q8IZ83 802 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 ADAMTS19Q8TE59 1207 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 HSH2DQ96JZ2 352 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 BRD7Q9NPI1 651 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 KIAA1024Q9UPX6 916 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 KCNH4Q9UQ05 1017 aa3.5□□□□□ -1.85
SNRNP40-207ENST00000491106 SPDYE3A6NKU9 549 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 GNB5O14775 395 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 THBS1P07996 1170 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 EPXP11678 715 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 HIF1AQ16665 826 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 PRRT3Q5FWE3 981 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 TRAPPC3LQ5T215 181 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 SH3PXD2AQ5TCZ1 1133 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 C1orf229Q6ZS94 237 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 CHSY3Q70JA7 882 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 ANKMY2Q8IV38 441 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 ZDHHC1Q8WTX9 485 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 DCAF5Q96JK2 942 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 SUSD3Q96L08 255 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 UCN2Q96RP3 112 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 UBE2OQ9C0C9 1292 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 LRRC4BQ9NT99 713 aa3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 NOP53Q9NZM5 478 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 IQSEC3Q9UPP2 1182 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 MAFBQ9Y5Q3 323 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-207ENST00000491106 A6NJR5 290 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 APBA3O96018 575 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 EPB42P16452 691 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 SPEM2Q0P670 501 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 TRIM28Q13263 835 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 LAMC2Q13753 1193 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 C1orf53Q5VUE5 145 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 KRT25Q7Z3Z0 450 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 ZNF280CQ8ND82 737 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 PLVAPQ9BX97 442 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 STRN4Q9NRL3 753 aa3.48□□□□□ -1.85
SNRNP40-207ENST00000491106 ELOA3CA0A087WX78 387 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 ELOA3DA6NLF2 546 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 EML1O00423 815 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 FAM157BP0CG42 384 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 ARID4AP29374 1257 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 UBAP2LQ14157 1087 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 PLA2G4EQ3MJ16 856 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 ELOA3BQ3SY89 546 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 CRTC2Q53ET0 693 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 FAM182BQ5T319 152 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 ZNF468Q5VIY5 522 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 SLCO4C1Q6ZQN7 724 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 BTLAQ7Z6A9 289 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 CMTR1Q8N1G2 835 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 MICALL1Q8N3F8 863 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 TTC16Q8NEE8 873 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 ELOA3Q8NG57 546 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 NUDT8Q8WV74 236 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 CCDC97Q96F63 343 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 PRIMPOLQ96LW4 560 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 SLC30A3Q99726 388 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 SUV39H2Q9H5I1 410 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 NDFIP2Q9NV92 336 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 KLK14Q9P0G3 267 aa3.47□□□□□ -1.85
SNRNP40-207ENST00000491106 USP17L15C9J2P7 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L10C9JJH3 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L13C9JLJ4 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L12C9JPN9 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L11C9JVI0 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L21D6R901 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L18D6R9N7 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L22D6RA61 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L17D6RBQ6 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L19D6RCP7 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L20D6RJB6 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 M0R082 166 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 M0R2N6 131 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 PRMT3O60678 531 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 USP17L24Q0WX57 530 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 PTK7Q13308 1070 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 DGKZQ13574 1117 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 SUZ12Q15022 739 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 SAMD5Q5TGI4 173 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 FCHSD1Q86WN1 690 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 SIX5Q8N196 739 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 FNBP4Q8N3X1 1017 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 ZNF417Q8TAU3 575 aa3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 ZNF587Q96SQ5 575 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-207ENST00000491106 ACIN1Q9UKV3 1341 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms