RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 ADRA2BP18089 450 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 HLFQ16534 295 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 KIF6Q6ZMV9 814 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 NARFQ9UHQ1 456 aa13.77□□□□□ -0.21
CACNA1C-227ENST00000491104 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
CACNA1C-227ENST00000491104 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-227ENST00000491104 MSL1Q68DK7 614 aa13.76□□□□□ -0.21
CACNA1C-227ENST00000491104 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
CACNA1C-227ENST00000491104 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-227ENST00000491104 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
CACNA1C-227ENST00000491104 ADCY9O60503 1353 aa13.75□□□□□ -0.21
CACNA1C-227ENST00000491104 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
CACNA1C-227ENST00000491104 F6X3S4 739 aa13.75□□□□□ -0.21
CACNA1C-227ENST00000491104 ZPR1O75312 459 aa13.75□□□□□ -0.21
CACNA1C-227ENST00000491104 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-227ENST00000491104 AFDNP55196 1824 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-227ENST00000491104 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 GYS1P13807 737 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 FKBP8Q14318 412 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 PLBD2Q8NHP8 589 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 MAP3K2Q9Y2U5 619 aa13.74□□□□□ -0.21
CACNA1C-227ENST00000491104 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
CACNA1C-227ENST00000491104 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
CACNA1C-227ENST00000491104 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-227ENST00000491104 BICDL1Q6ZP65 573 aa13.73□□□□□ -0.21
CACNA1C-227ENST00000491104 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
CACNA1C-227ENST00000491104 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 PLIN1O60240 522 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 GPTP24298 496 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 TBC1D9BQ66K14 1250 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 KSR2Q6VAB6 950 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 MYD88Q99836 296 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 N4BP2Q86UW6 1770 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
CACNA1C-227ENST00000491104 PTPRCP08575 1304 aa13.71□□□□□ -0.21
CACNA1C-227ENST00000491104 ATP5J2-PTCD1G3V325 749 aa13.71□□□□□ -0.21
CACNA1C-227ENST00000491104 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
CACNA1C-227ENST00000491104 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
CACNA1C-227ENST00000491104 UBN2Q6ZU65 1347 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 TRIM27P14373 513 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 NFIXQ14938 502 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 SLC4A10Q6U841 1118 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 NIP7Q9Y221 180 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
CACNA1C-227ENST00000491104 DDR1Q08345 913 aa13.69□□□□□ -0.22
CACNA1C-227ENST00000491104 API5Q9BZZ5 524 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-227ENST00000491104 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 CLEC4GQ6UXB4 293 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
CACNA1C-227ENST00000491104 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 IPO8O15397 1037 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 MMP10P09238 476 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 TM4SF1P30408 202 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 NLGN1Q8N2Q7 840 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 ARHGAP45Q92619 1136 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
CACNA1C-227ENST00000491104 ABCC4O15439 1325 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 NEURL1BA8MQ27 555 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 RLBP1P12271 317 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 NEXNQ0ZGT2 675 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 C20orf194Q5TEA3 1177 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 SUSD4Q5VX71 490 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 CARMIL3Q8ND23 1372 aa13.66□□□□□ -0.22
CACNA1C-227ENST00000491104 RGL2O15211 777 aa13.65□□□□□ -0.22
CACNA1C-227ENST00000491104 SERPINB2P05120 415 aa13.65□□□□□ -0.22
CACNA1C-227ENST00000491104 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-227ENST00000491104 TMEM57Q8N5G2 664 aa13.65□□□□□ -0.22
CACNA1C-227ENST00000491104 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 PTGER2P43116 358 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms