RNA–Protein interactions for RNA: ENST00000491066.1

PLXNA3-206, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-206ENST00000491066 POTEIP0CG38 1075 aa25.04■■□□□ 1.6
PLXNA3-206ENST00000491066 POTEJP0CG39 1038 aa25.04■■□□□ 1.6
PLXNA3-206ENST00000491066 MKRN1Q9UHC7 482 aaKnown RBP25.04■■□□□ 1.6
PLXNA3-206ENST00000491066 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
PLXNA3-206ENST00000491066 IQCA1LA6NCM1 817 aa25.03■■□□□ 1.6
PLXNA3-206ENST00000491066 DZIP3Q86Y13 1208 aaKnown RBP25.03■■□□□ 1.6
PLXNA3-206ENST00000491066 C7orf43Q8WVR3 580 aa25.03■■□□□ 1.6
PLXNA3-206ENST00000491066 SLX4Q8IY92 1834 aa25.02■■□□□ 1.6
PLXNA3-206ENST00000491066 COL3A1P02461 1466 aaPredicted RBP25.02■■□□□ 1.6
PLXNA3-206ENST00000491066 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
PLXNA3-206ENST00000491066 L3MBTL3Q96JM7 780 aaPredicted RBP25.02■■□□□ 1.6
PLXNA3-206ENST00000491066 SIPA1L3O60292 1781 aaPredicted RBP25.02■■□□□ 1.6
PLXNA3-206ENST00000491066 BTBD11A6QL63 1104 aa25.01■■□□□ 1.59
PLXNA3-206ENST00000491066 KCNQ3O43525 872 aa25.01■■□□□ 1.59
PLXNA3-206ENST00000491066 LDHDQ86WU2 507 aa25.01■■□□□ 1.59
PLXNA3-206ENST00000491066 USP16Q9Y5T5 823 aa25■■□□□ 1.59
PLXNA3-206ENST00000491066 PASKQ96RG2 1323 aa25■■□□□ 1.59
PLXNA3-206ENST00000491066 NPC1L1Q9UHC9 1359 aa25■■□□□ 1.59
PLXNA3-206ENST00000491066 CNTNAP1P78357 1384 aa24.99■■□□□ 1.59
PLXNA3-206ENST00000491066 NBPF5PQ86XG9 351 aaPredicted RBP24.99■■□□□ 1.59
PLXNA3-206ENST00000491066 TAF1DQ9H5J8 278 aaPredicted RBP24.99■■□□□ 1.59
PLXNA3-206ENST00000491066 KLRG2A4D1S0 409 aaPredicted RBP24.98■■□□□ 1.59
PLXNA3-206ENST00000491066 CCDC93Q567U6 631 aa24.98■■□□□ 1.59
PLXNA3-206ENST00000491066 NPR1P16066 1061 aa24.97■■□□□ 1.59
PLXNA3-206ENST00000491066 PHACTR3Q96KR7 559 aa24.97■■□□□ 1.59
PLXNA3-206ENST00000491066 ZNF652Q9Y2D9 606 aa24.97■■□□□ 1.59
PLXNA3-206ENST00000491066 ARFGEF2Q9Y6D5 1785 aa24.96■■□□□ 1.59
PLXNA3-206ENST00000491066 RGL2O15211 777 aa24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 FOXN1O15353 648 aa24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 ITGBL1O95965 494 aaPredicted RBP24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 PIP4K2AP48426 406 aaPredicted RBP24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 FKBP4Q02790 459 aaKnown RBP eCLIP24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 TPTE2Q6XPS3 522 aa24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 CCER1Q8TC90 406 aaPredicted RBP24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 PRDM10Q9NQV6 1147 aa24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 BCORQ6W2J9 1755 aa24.95■■□□□ 1.58
PLXNA3-206ENST00000491066 SCN4AP35499 1836 aa24.94■■□□□ 1.58
PLXNA3-206ENST00000491066 SNRPA1P09661 255 aaKnown RBP24.94■■□□□ 1.58
PLXNA3-206ENST00000491066 PRAMEF22A3QJZ6 481 aa24.93■■□□□ 1.58
PLXNA3-206ENST00000491066 TMEM88BA6NKF7 163 aa24.93■■□□□ 1.58
PLXNA3-206ENST00000491066 PRKAR2BP31323 418 aa24.93■■□□□ 1.58
PLXNA3-206ENST00000491066 RTKN2Q8IZC4 609 aa24.93■■□□□ 1.58
PLXNA3-206ENST00000491066 RSPH6AQ9H0K4 717 aa24.93■■□□□ 1.58
PLXNA3-206ENST00000491066 ZNF277Q9NRM2 450 aaPredicted RBP24.92■■□□□ 1.58
PLXNA3-206ENST00000491066 CACNA1SQ13698 1873 aa24.92■■□□□ 1.58
PLXNA3-206ENST00000491066 VEGFBP49765 207 aa24.91■■□□□ 1.58
PLXNA3-206ENST00000491066 HACL1Q9UJ83 578 aa24.91■■□□□ 1.58
PLXNA3-206ENST00000491066 ZNF541Q9H0D2 1346 aa24.9■■□□□ 1.58
PLXNA3-206ENST00000491066 CNGB1Q14028 1251 aaPredicted RBP24.9■■□□□ 1.58
PLXNA3-206ENST00000491066 NIP7Q9Y221 180 aaKnown RBP eCLIP24.9■■□□□ 1.58
PLXNA3-206ENST00000491066 NBPF26B4DH59 902 aa24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 ALDH1B1P30837 517 aa24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 CTCFP49711 727 aaPredicted RBP24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 EAPPQ56P03 285 aaPredicted RBP24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 NBPF10Q6P3W6 841 aaKnown RBP24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 NBPF15Q8N660 670 aa24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 AIDAQ96BJ3 306 aa24.89■■□□□ 1.58
PLXNA3-206ENST00000491066 FZD9O00144 591 aa24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 EPHX2P34913 555 aa24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 OLFM4Q6UX06 510 aa24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 PNMA8AQ86V59 439 aaPredicted RBP24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 RTF1Q92541 710 aaKnown RBP24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 CFAP53Q96M91 514 aa24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 CLEC11AQ9Y240 323 aa24.88■■□□□ 1.57
PLXNA3-206ENST00000491066 WBP1LQ9NX94 342 aa24.87■■□□□ 1.57
PLXNA3-206ENST00000491066 IARSP41252 1262 aaKnown RBP24.86■■□□□ 1.57
PLXNA3-206ENST00000491066 MCM10Q7L590 875 aa24.86■■□□□ 1.57
PLXNA3-206ENST00000491066 SYNE4Q8N205 404 aa24.86■■□□□ 1.57
PLXNA3-206ENST00000491066 NUDCQ9Y266 331 aa24.86■■□□□ 1.57
PLXNA3-206ENST00000491066 CNTROBQ8N137 903 aa24.85■■□□□ 1.57
PLXNA3-206ENST00000491066 RASSF10A6NK89 507 aa24.84■■□□□ 1.57
PLXNA3-206ENST00000491066 FAM177BA6PVY3 158 aa24.84■■□□□ 1.57
PLXNA3-206ENST00000491066 HTATSF1O43719 755 aaKnown RBP24.84■■□□□ 1.57
PLXNA3-206ENST00000491066 GPC2Q8N158 579 aa24.84■■□□□ 1.57
PLXNA3-206ENST00000491066 ADAMTSL1Q8N6G6 1762 aa24.83■■□□□ 1.57
PLXNA3-206ENST00000491066 HLFQ16534 295 aa24.83■■□□□ 1.57
PLXNA3-206ENST00000491066 DEFB115Q30KQ5 88 aa24.83■■□□□ 1.57
PLXNA3-206ENST00000491066 PSMD1Q99460 953 aa24.83■■□□□ 1.57
PLXNA3-206ENST00000491066 RNF123Q5XPI4 1314 aa24.83■■□□□ 1.56
PLXNA3-206ENST00000491066 GTF2E1P29083 439 aaPredicted RBP24.82■■□□□ 1.56
PLXNA3-206ENST00000491066 MAP1SQ66K74 1059 aaPredicted RBP24.82■■□□□ 1.56
PLXNA3-206ENST00000491066 U2AF1L5P0DN76 240 aaPredicted RBP24.81■■□□□ 1.56
PLXNA3-206ENST00000491066 U2AF1Q01081 240 aaKnown RBP eCLIP24.81■■□□□ 1.56
PLXNA3-206ENST00000491066 CRY2Q49AN0 593 aa24.81■■□□□ 1.56
PLXNA3-206ENST00000491066 JDP2Q8WYK2 163 aa24.81■■□□□ 1.56
PLXNA3-206ENST00000491066 SNED1Q8TER0 1413 aa24.8■■□□□ 1.56
PLXNA3-206ENST00000491066 LBX1P52954 281 aa24.8■■□□□ 1.56
PLXNA3-206ENST00000491066 DCTN1Q14203 1278 aa24.8■■□□□ 1.56
PLXNA3-206ENST00000491066 TAF7Q15545 349 aaPredicted RBP24.8■■□□□ 1.56
PLXNA3-206ENST00000491066 CC2D2BQ6DHV5 1058 aa24.8■■□□□ 1.56
PLXNA3-206ENST00000491066 NYXQ9GZU5 481 aa24.8■■□□□ 1.56
PLXNA3-206ENST00000491066 ERVV-1B6SEH8 477 aa24.78■■□□□ 1.56
PLXNA3-206ENST00000491066 EIF6P56537 245 aaKnown RBP24.77■■□□□ 1.56
PLXNA3-206ENST00000491066 MAP2K1Q02750 393 aaPredicted RBP24.77■■□□□ 1.56
PLXNA3-206ENST00000491066 GRIPAP1Q4V328 841 aa24.77■■□□□ 1.56
PLXNA3-206ENST00000491066 WDR33Q9C0J8 1336 aaKnown RBP24.77■■□□□ 1.56
PLXNA3-206ENST00000491066 HOXA10P31260 410 aaPredicted RBP24.76■■□□□ 1.55
PLXNA3-206ENST00000491066 HSPA8P11142 646 aaKnown RBP24.75■■□□□ 1.55
PLXNA3-206ENST00000491066 NUTM1Q86Y26 1132 aa24.75■■□□□ 1.55
PLXNA3-206ENST00000491066 DDX21Q9NR30 783 aaKnown RBP eCLIP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms