RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ARFGEF2Q9Y6D5 1785 aa20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 EAPPQ56P03 285 aaPredicted RBP20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 CC2D1BQ5T0F9 858 aaKnown RBP20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 STYK1Q6J9G0 422 aa20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 OLFM4Q6UX06 510 aa20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 LDHDQ86WU2 507 aa20.73■□□□□ 0.91
SCAMP3-208ENST00000490999 KCNQ3O43525 872 aa20.72■□□□□ 0.91
SCAMP3-208ENST00000490999 TAF1DQ9H5J8 278 aaPredicted RBP20.72■□□□□ 0.91
SCAMP3-208ENST00000490999 IQCA1LA6NCM1 817 aa20.71■□□□□ 0.91
SCAMP3-208ENST00000490999 U2SURPO15042 1029 aaKnown RBP20.71■□□□□ 0.91
SCAMP3-208ENST00000490999 VEGFBP49765 207 aa20.71■□□□□ 0.91
SCAMP3-208ENST00000490999 DZIP3Q86Y13 1208 aaKnown RBP20.71■□□□□ 0.91
SCAMP3-208ENST00000490999 MASTLQ96GX5 879 aa20.71■□□□□ 0.91
SCAMP3-208ENST00000490999 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
SCAMP3-208ENST00000490999 GNAT3A8MTJ3 354 aa20.7■□□□□ 0.9
SCAMP3-208ENST00000490999 AIDAQ96BJ3 306 aa20.7■□□□□ 0.9
SCAMP3-208ENST00000490999 L3MBTL3Q96JM7 780 aaPredicted RBP20.7■□□□□ 0.9
SCAMP3-208ENST00000490999 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
SCAMP3-208ENST00000490999 KIF7Q2M1P5 1343 aa20.7■□□□□ 0.9
SCAMP3-208ENST00000490999 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 NBPF5PQ86XG9 351 aaPredicted RBP20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 TEX13AQ9BXU3 409 aaPredicted RBP20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
SCAMP3-208ENST00000490999 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
SCAMP3-208ENST00000490999 C7orf43Q8WVR3 580 aa20.68■□□□□ 0.9
SCAMP3-208ENST00000490999 TMEM88BA6NKF7 163 aa20.67■□□□□ 0.9
SCAMP3-208ENST00000490999 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
SCAMP3-208ENST00000490999 PRDM10Q9NQV6 1147 aa20.67■□□□□ 0.9
SCAMP3-208ENST00000490999 CLEC11AQ9Y240 323 aa20.67■□□□□ 0.9
SCAMP3-208ENST00000490999 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
SCAMP3-208ENST00000490999 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
SCAMP3-208ENST00000490999 FAM177BA6PVY3 158 aa20.66■□□□□ 0.9
SCAMP3-208ENST00000490999 ITGBL1O95965 494 aaPredicted RBP20.66■□□□□ 0.9
SCAMP3-208ENST00000490999 LBX1P52954 281 aa20.66■□□□□ 0.9
SCAMP3-208ENST00000490999 CEMIPQ8WUJ3 1361 aa20.66■□□□□ 0.9
SCAMP3-208ENST00000490999 SCN4AP35499 1836 aa20.65■□□□□ 0.9
SCAMP3-208ENST00000490999 BTBD11A6QL63 1104 aa20.65■□□□□ 0.9
SCAMP3-208ENST00000490999 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP3-208ENST00000490999 MAP1SQ66K74 1059 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-208ENST00000490999 HACL1Q9UJ83 578 aa20.65■□□□□ 0.9
SCAMP3-208ENST00000490999 USP16Q9Y5T5 823 aa20.65■□□□□ 0.9
SCAMP3-208ENST00000490999 EPHX2P34913 555 aa20.64■□□□□ 0.89
SCAMP3-208ENST00000490999 NPR1P16066 1061 aa20.63■□□□□ 0.89
SCAMP3-208ENST00000490999 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
SCAMP3-208ENST00000490999 PHACTR3Q96KR7 559 aa20.62■□□□□ 0.89
SCAMP3-208ENST00000490999 PER1O15534 1290 aaPredicted RBP20.61■□□□□ 0.89
SCAMP3-208ENST00000490999 HSPA8P11142 646 aaKnown RBP20.61■□□□□ 0.89
SCAMP3-208ENST00000490999 NIP7Q9Y221 180 aaKnown RBP eCLIP20.61■□□□□ 0.89
SCAMP3-208ENST00000490999 ZNF652Q9Y2D9 606 aa20.61■□□□□ 0.89
SCAMP3-208ENST00000490999 COL4A5P29400 1685 aa20.61■□□□□ 0.89
SCAMP3-208ENST00000490999 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
SCAMP3-208ENST00000490999 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
SCAMP3-208ENST00000490999 ABT1Q9ULW3 272 aaKnown RBP20.6■□□□□ 0.89
SCAMP3-208ENST00000490999 ABCC12Q96J65 1359 aa20.59■□□□□ 0.89
SCAMP3-208ENST00000490999 RASSF10A6NK89 507 aa20.59■□□□□ 0.89
SCAMP3-208ENST00000490999 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
SCAMP3-208ENST00000490999 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
SCAMP3-208ENST00000490999 KLRG2A4D1S0 409 aaPredicted RBP20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 NBPF26B4DH59 902 aa20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 FAM161AQ3B820 660 aa20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 NBPF10Q6P3W6 841 aaKnown RBP20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 MCM10Q7L590 875 aa20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 NBPF15Q8N660 670 aa20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 ABHD8Q96I13 439 aa20.58■□□□□ 0.89
SCAMP3-208ENST00000490999 SNED1Q8TER0 1413 aa20.58■□□□□ 0.88
SCAMP3-208ENST00000490999 LTBP1Q14766 1721 aa20.58■□□□□ 0.88
SCAMP3-208ENST00000490999 FZD9O00144 591 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 DEFB115Q30KQ5 88 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 CLEC4GQ6UXB4 293 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 RTKN2Q8IZC4 609 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 RSPH6AQ9H0K4 717 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 GJA3Q9Y6H8 435 aa20.57■□□□□ 0.88
SCAMP3-208ENST00000490999 WDR33Q9C0J8 1336 aaKnown RBP20.56■□□□□ 0.88
SCAMP3-208ENST00000490999 GRM1Q13255 1194 aa20.56■□□□□ 0.88
SCAMP3-208ENST00000490999 HLFQ16534 295 aa20.56■□□□□ 0.88
SCAMP3-208ENST00000490999 TPTE2Q6XPS3 522 aa20.56■□□□□ 0.88
SCAMP3-208ENST00000490999 PAXIP1Q6ZW49 1069 aaPredicted RBP20.56■□□□□ 0.88
SCAMP3-208ENST00000490999 PNMA8AQ86V59 439 aaPredicted RBP20.56■□□□□ 0.88
SCAMP3-208ENST00000490999 SNRPA1P09661 255 aaKnown RBP20.55■□□□□ 0.88
SCAMP3-208ENST00000490999 GPC2Q8N158 579 aa20.55■□□□□ 0.88
SCAMP3-208ENST00000490999 THSD7BQ9C0I4 1608 aa20.55■□□□□ 0.88
SCAMP3-208ENST00000490999 DCTN1Q14203 1278 aa20.54■□□□□ 0.88
SCAMP3-208ENST00000490999 NUTM1Q86Y26 1132 aa20.54■□□□□ 0.88
SCAMP3-208ENST00000490999 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-208ENST00000490999 DDX21Q9NR30 783 aaKnown RBP eCLIP20.53■□□□□ 0.88
SCAMP3-208ENST00000490999 JDP2Q8WYK2 163 aa20.52■□□□□ 0.88
SCAMP3-208ENST00000490999 TRAF5O00463 557 aa20.51■□□□□ 0.87
SCAMP3-208ENST00000490999 MAP2K1Q02750 393 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-208ENST00000490999 NGEFQ8N5V2 710 aa20.51■□□□□ 0.87
SCAMP3-208ENST00000490999 PSMD1Q99460 953 aa20.51■□□□□ 0.87
SCAMP3-208ENST00000490999 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
SCAMP3-208ENST00000490999 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 SLC34A2O95436 690 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 LMOD1P29536 600 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms