RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
RIPPLY3-203ENST00000490393 SLIT2O94813 1529 aa16.79■□□□□ 0.28
RIPPLY3-203ENST00000490393 BCL9O00512 1426 aa16.79■□□□□ 0.28
RIPPLY3-203ENST00000490393 AOX1Q06278 1338 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 SDSP20132 328 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
RIPPLY3-203ENST00000490393 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.27
RIPPLY3-203ENST00000490393 A1BGP04217 495 aa16.77■□□□□ 0.27
RIPPLY3-203ENST00000490393 ASAP1Q9ULH1 1129 aa16.77■□□□□ 0.27
RIPPLY3-203ENST00000490393 ARFGEF2Q9Y6D5 1785 aa16.77■□□□□ 0.27
RIPPLY3-203ENST00000490393 MX1P20591 662 aa16.76■□□□□ 0.27
RIPPLY3-203ENST00000490393 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
RIPPLY3-203ENST00000490393 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
RIPPLY3-203ENST00000490393 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
RIPPLY3-203ENST00000490393 BECN1Q14457 450 aa16.75■□□□□ 0.27
RIPPLY3-203ENST00000490393 BICC1Q9H694 974 aaKnown RBP16.75■□□□□ 0.27
RIPPLY3-203ENST00000490393 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
RIPPLY3-203ENST00000490393 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
RIPPLY3-203ENST00000490393 STARD3NLO95772 234 aa16.74■□□□□ 0.27
RIPPLY3-203ENST00000490393 DDB1Q16531 1140 aa16.74■□□□□ 0.27
RIPPLY3-203ENST00000490393 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
RIPPLY3-203ENST00000490393 H7C1W4 665 aa16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 CASP7P55210 303 aa16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 JCADQ9P266 1359 aa16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 RABL6Q3YEC7 729 aaPredicted RBP16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
RIPPLY3-203ENST00000490393 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
RIPPLY3-203ENST00000490393 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
RIPPLY3-203ENST00000490393 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
RIPPLY3-203ENST00000490393 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
RIPPLY3-203ENST00000490393 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
RIPPLY3-203ENST00000490393 TRIM28Q13263 835 aaKnown RBP16.71■□□□□ 0.27
RIPPLY3-203ENST00000490393 CCDC191Q8NCU4 936 aa16.71■□□□□ 0.27
RIPPLY3-203ENST00000490393 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
RIPPLY3-203ENST00000490393 A0A087WZG4 1122 aa16.71■□□□□ 0.27
RIPPLY3-203ENST00000490393 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
RIPPLY3-203ENST00000490393 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
RIPPLY3-203ENST00000490393 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
RIPPLY3-203ENST00000490393 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
RIPPLY3-203ENST00000490393 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
RIPPLY3-203ENST00000490393 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
RIPPLY3-203ENST00000490393 SLC4A3P48751 1232 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 VPS72Q15906 364 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 FNBP4Q8N3X1 1017 aaPredicted RBP16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 BCL11AQ9H165 835 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 OS9Q13438 667 aaPredicted RBP16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
RIPPLY3-203ENST00000490393 RFX5P48382 616 aaPredicted RBP16.68■□□□□ 0.26
RIPPLY3-203ENST00000490393 UBE3BQ7Z3V4 1068 aa16.68■□□□□ 0.26
RIPPLY3-203ENST00000490393 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
RIPPLY3-203ENST00000490393 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
RIPPLY3-203ENST00000490393 USP26Q9BXU7 913 aa16.68■□□□□ 0.26
RIPPLY3-203ENST00000490393 SPATA31A6Q5VVP1 1343 aa16.68■□□□□ 0.26
RIPPLY3-203ENST00000490393 SASH1O94885 1247 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 SNX21Q969T3 373 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 FOXO4P98177 505 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 KIF2CQ99661 725 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
RIPPLY3-203ENST00000490393 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
RIPPLY3-203ENST00000490393 ERC2O15083 957 aa16.66■□□□□ 0.26
RIPPLY3-203ENST00000490393 REC8O95072 547 aa16.66■□□□□ 0.26
RIPPLY3-203ENST00000490393 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
RIPPLY3-203ENST00000490393 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
RIPPLY3-203ENST00000490393 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 TSHZ3Q63HK5 1081 aa16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 KIF6Q6ZMV9 814 aa16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 CHMLP26374 656 aa16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 GIGYF2Q6Y7W6 1299 aaKnown RBP16.65■□□□□ 0.26
RIPPLY3-203ENST00000490393 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
RIPPLY3-203ENST00000490393 CERKQ8TCT0 537 aa16.64■□□□□ 0.25
RIPPLY3-203ENST00000490393 TRIM6-TRIM34B2RNG4 842 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 ERVV-1B6SEH8 477 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 HSP90AB3PQ58FF7 597 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 JARID2Q92833 1246 aaPredicted RBP16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms