RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 NOD1Q9Y239 953 aa7.7□□□□□ -1.18
RBM39-235ENST00000490354 ELOA3CA0A087WX78 387 aaPredicted RBP7.69□□□□□ -1.18
RBM39-235ENST00000490354 ELOA3DA6NLF2 546 aaPredicted RBP7.69□□□□□ -1.18
RBM39-235ENST00000490354 PSME1Q06323 249 aa7.69□□□□□ -1.18
RBM39-235ENST00000490354 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
RBM39-235ENST00000490354 LRRC69Q6ZNQ3 347 aa7.69□□□□□ -1.18
RBM39-235ENST00000490354 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
RBM39-235ENST00000490354 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
RBM39-235ENST00000490354 WIZO95785 1651 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 SPATA31C1P0DKV0 1188 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 NOS2P35228 1153 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 GATA4P43694 442 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 EPHA4P54764 986 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 NCOA4Q13772 614 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 TEAD4Q15561 434 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 TBCELQ5QJ74 424 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 MDFIQ99750 246 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 COG6Q9Y2V7 657 aa7.68□□□□□ -1.18
RBM39-235ENST00000490354 BAZ1BQ9UIG0 1483 aaKnown RBP7.68□□□□□ -1.18
RBM39-235ENST00000490354 TOP2AP11388 1531 aaKnown RBP7.68□□□□□ -1.18
RBM39-235ENST00000490354 EML1O00423 815 aa7.67□□□□□ -1.18
RBM39-235ENST00000490354 ALAS2P22557 587 aa7.67□□□□□ -1.18
RBM39-235ENST00000490354 ALG2Q9H553 416 aa7.67□□□□□ -1.18
RBM39-235ENST00000490354 LZTS3O60299 673 aaPredicted RBP7.66□□□□□ -1.18
RBM39-235ENST00000490354 SFSWAPQ12872 951 aaKnown RBP7.66□□□□□ -1.18
RBM39-235ENST00000490354 SH3PXD2AQ5TCZ1 1133 aa7.66□□□□□ -1.18
RBM39-235ENST00000490354 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
RBM39-235ENST00000490354 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
RBM39-235ENST00000490354 DEPDC4Q8N2C3 294 aa7.66□□□□□ -1.18
RBM39-235ENST00000490354 C7orf43Q8WVR3 580 aa7.66□□□□□ -1.18
RBM39-235ENST00000490354 ZNF232Q9UNY5 417 aa7.66□□□□□ -1.18
RBM39-235ENST00000490354 SIN3BO75182 1162 aa7.65□□□□□ -1.18
RBM39-235ENST00000490354 SLC30A3Q99726 388 aa7.65□□□□□ -1.18
RBM39-235ENST00000490354 NEUROD4Q9HD90 331 aa7.65□□□□□ -1.18
RBM39-235ENST00000490354 CCDC88BA6NC98 1476 aa7.64□□□□□ -1.19
RBM39-235ENST00000490354 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
RBM39-235ENST00000490354 NFATC2IPQ8NCF5 419 aa7.64□□□□□ -1.19
RBM39-235ENST00000490354 HMGXB3Q12766 1538 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 USP17L5A8MUK1 530 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 M0R082 166 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 COL9A3Q14050 684 aaPredicted RBP7.63□□□□□ -1.19
RBM39-235ENST00000490354 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 C8orf86Q6ZUL3 223 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 ZNF417Q8TAU3 575 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 RHPN1Q8TCX5 695 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 ZNF587Q96SQ5 575 aaPredicted RBP7.63□□□□□ -1.19
RBM39-235ENST00000490354 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 STARD13Q9Y3M8 1113 aa7.63□□□□□ -1.19
RBM39-235ENST00000490354 GPC6Q9Y625 555 aaPredicted RBP7.63□□□□□ -1.19
RBM39-235ENST00000490354 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
RBM39-235ENST00000490354 SPDYE3A6NKU9 549 aa7.62□□□□□ -1.19
RBM39-235ENST00000490354 ALBP02768 609 aa7.62□□□□□ -1.19
RBM39-235ENST00000490354 RSPO4Q2I0M5 234 aaPredicted RBP7.62□□□□□ -1.19
RBM39-235ENST00000490354 RAB44Q7Z6P3 723 aaPredicted RBP7.62□□□□□ -1.19
RBM39-235ENST00000490354 KIAA1024Q9UPX6 916 aa7.62□□□□□ -1.19
RBM39-235ENST00000490354 CC2D2AQ9P2K1 1620 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 ZBTB7BO15156 539 aaPredicted RBP7.61□□□□□ -1.19
RBM39-235ENST00000490354 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 ZMYM1Q5SVZ6 1142 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 TPCN2Q8NHX9 752 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 POM121Q96HA1 1249 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 HSH2DQ96JZ2 352 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 TPSG1Q9NRR2 321 aa7.61□□□□□ -1.19
RBM39-235ENST00000490354 APBA3O96018 575 aa7.6□□□□□ -1.19
RBM39-235ENST00000490354 MICALL1Q8N3F8 863 aa7.6□□□□□ -1.19
RBM39-235ENST00000490354 TSPAN10Q9H1Z9 355 aaPredicted RBP7.6□□□□□ -1.19
RBM39-235ENST00000490354 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
RBM39-235ENST00000490354 ADH7P40394 386 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 CLDN10P78369 228 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 NKAPLQ5M9Q1 402 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 TRIM50Q86XT4 487 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 CEP63Q96MT8 703 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 PRDM6Q9NQX0 595 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
RBM39-235ENST00000490354 NID1P14543 1247 aa7.58□□□□□ -1.2
RBM39-235ENST00000490354 PSMA6P60900 246 aaKnown RBP7.58□□□□□ -1.2
RBM39-235ENST00000490354 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
RBM39-235ENST00000490354 GRIK4Q16099 956 aa7.58□□□□□ -1.2
RBM39-235ENST00000490354 WWC1Q8IX03 1113 aa7.58□□□□□ -1.2
RBM39-235ENST00000490354 ADAMTS19Q8TE59 1207 aa7.58□□□□□ -1.2
RBM39-235ENST00000490354 PHACTR1Q9C0D0 580 aa7.58□□□□□ -1.2
RBM39-235ENST00000490354 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 POM121CA8CG34 1229 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 ATP1A2P50993 1020 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 NEUROD1Q13562 356 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 FOXD4L6Q3SYB3 417 aaPredicted RBP7.57□□□□□ -1.2
RBM39-235ENST00000490354 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 FOXD4L3Q6VB84 417 aaPredicted RBP7.57□□□□□ -1.2
RBM39-235ENST00000490354 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 ZNF280CQ8ND82 737 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
RBM39-235ENST00000490354 KCNH4Q9UQ05 1017 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms