RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 SOGA3Q5TF21 947 aa29.97■■■□□ 2.39
HOXA9-205ENST00000489695 NPM2Q86SE8 214 aaKnown RBP29.97■■■□□ 2.39
HOXA9-205ENST00000489695 MASTLQ96GX5 879 aa29.97■■■□□ 2.39
HOXA9-205ENST00000489695 DDNO94850 711 aaPredicted RBP29.96■■■□□ 2.39
HOXA9-205ENST00000489695 SLX4Q8IY92 1834 aa29.95■■■□□ 2.39
HOXA9-205ENST00000489695 KCNQ3O43525 872 aa29.95■■■□□ 2.39
HOXA9-205ENST00000489695 DZIP3Q86Y13 1208 aaKnown RBP29.95■■■□□ 2.39
HOXA9-205ENST00000489695 BTBD11A6QL63 1104 aa29.94■■■□□ 2.38
HOXA9-205ENST00000489695 NPHP1O15259 732 aa29.94■■■□□ 2.38
HOXA9-205ENST00000489695 POTEIP0CG38 1075 aa29.94■■■□□ 2.38
HOXA9-205ENST00000489695 POTEJP0CG39 1038 aa29.94■■■□□ 2.38
HOXA9-205ENST00000489695 CLEC4GQ6UXB4 293 aa29.93■■■□□ 2.38
HOXA9-205ENST00000489695 C7orf43Q8WVR3 580 aa29.93■■■□□ 2.38
HOXA9-205ENST00000489695 PHACTR3Q96KR7 559 aa29.93■■■□□ 2.38
HOXA9-205ENST00000489695 USP16Q9Y5T5 823 aa29.92■■■□□ 2.38
HOXA9-205ENST00000489695 BCORQ6W2J9 1755 aa29.92■■■□□ 2.38
HOXA9-205ENST00000489695 L3MBTL3Q96JM7 780 aaPredicted RBP29.91■■■□□ 2.38
HOXA9-205ENST00000489695 ARFGEF2Q9Y6D5 1785 aa29.9■■■□□ 2.38
HOXA9-205ENST00000489695 KLRG2A4D1S0 409 aaPredicted RBP29.89■■■□□ 2.38
HOXA9-205ENST00000489695 IQCA1LA6NCM1 817 aa29.89■■■□□ 2.38
HOXA9-205ENST00000489695 MKRN1Q9UHC7 482 aaKnown RBP29.89■■■□□ 2.38
HOXA9-205ENST00000489695 NBPF5PQ86XG9 351 aaPredicted RBP29.88■■■□□ 2.37
HOXA9-205ENST00000489695 RSPH6AQ9H0K4 717 aa29.88■■■□□ 2.37
HOXA9-205ENST00000489695 PRKAR2BP31323 418 aa29.87■■■□□ 2.37
HOXA9-205ENST00000489695 PIP4K2AP48426 406 aaPredicted RBP29.87■■■□□ 2.37
HOXA9-205ENST00000489695 LDHDQ86WU2 507 aa29.87■■■□□ 2.37
HOXA9-205ENST00000489695 PASKQ96RG2 1323 aa29.87■■■□□ 2.37
HOXA9-205ENST00000489695 PRAMEF22A3QJZ6 481 aa29.86■■■□□ 2.37
HOXA9-205ENST00000489695 NPR1P16066 1061 aa29.86■■■□□ 2.37
HOXA9-205ENST00000489695 CCDC93Q567U6 631 aa29.86■■■□□ 2.37
HOXA9-205ENST00000489695 TAF1DQ9H5J8 278 aaPredicted RBP29.86■■■□□ 2.37
HOXA9-205ENST00000489695 ZNF652Q9Y2D9 606 aa29.86■■■□□ 2.37
HOXA9-205ENST00000489695 RGL2O15211 777 aa29.85■■■□□ 2.37
HOXA9-205ENST00000489695 SNRPA1P09661 255 aaKnown RBP29.85■■■□□ 2.37
HOXA9-205ENST00000489695 CNTNAP1P78357 1384 aa29.85■■■□□ 2.37
HOXA9-205ENST00000489695 CACNA1SQ13698 1873 aa29.85■■■□□ 2.37
HOXA9-205ENST00000489695 CNGB1Q14028 1251 aaPredicted RBP29.84■■■□□ 2.37
HOXA9-205ENST00000489695 FKBP4Q02790 459 aaKnown RBP eCLIP29.83■■■□□ 2.37
HOXA9-205ENST00000489695 SCN4AP35499 1836 aa29.82■■■□□ 2.36
HOXA9-205ENST00000489695 TPTE2Q6XPS3 522 aa29.82■■■□□ 2.36
HOXA9-205ENST00000489695 ITGBL1O95965 494 aaPredicted RBP29.81■■■□□ 2.36
HOXA9-205ENST00000489695 NBPF26B4DH59 902 aa29.8■■■□□ 2.36
HOXA9-205ENST00000489695 NBPF10Q6P3W6 841 aaKnown RBP29.8■■■□□ 2.36
HOXA9-205ENST00000489695 NBPF15Q8N660 670 aa29.8■■■□□ 2.36
HOXA9-205ENST00000489695 CFAP53Q96M91 514 aa29.8■■■□□ 2.36
HOXA9-205ENST00000489695 ZNF277Q9NRM2 450 aaPredicted RBP29.8■■■□□ 2.36
HOXA9-205ENST00000489695 ZNF541Q9H0D2 1346 aa29.79■■■□□ 2.36
HOXA9-205ENST00000489695 MCM10Q7L590 875 aa29.79■■■□□ 2.36
HOXA9-205ENST00000489695 RTKN2Q8IZC4 609 aa29.79■■■□□ 2.36
HOXA9-205ENST00000489695 NIP7Q9Y221 180 aaKnown RBP eCLIP29.79■■■□□ 2.36
HOXA9-205ENST00000489695 RTF1Q92541 710 aaKnown RBP29.78■■■□□ 2.36
HOXA9-205ENST00000489695 FOXN1O15353 648 aa29.77■■■□□ 2.36
HOXA9-205ENST00000489695 OLFM4Q6UX06 510 aa29.77■■■□□ 2.36
HOXA9-205ENST00000489695 NUDCQ9Y266 331 aa29.77■■■□□ 2.36
HOXA9-205ENST00000489695 TMEM88BA6NKF7 163 aa29.76■■■□□ 2.35
HOXA9-205ENST00000489695 HACL1Q9UJ83 578 aa29.76■■■□□ 2.35
HOXA9-205ENST00000489695 ALDH1B1P30837 517 aa29.75■■■□□ 2.35
HOXA9-205ENST00000489695 PRDM10Q9NQV6 1147 aa29.75■■■□□ 2.35
HOXA9-205ENST00000489695 FZD9O00144 591 aa29.74■■■□□ 2.35
HOXA9-205ENST00000489695 HTATSF1O43719 755 aaKnown RBP29.74■■■□□ 2.35
HOXA9-205ENST00000489695 VEGFBP49765 207 aa29.74■■■□□ 2.35
HOXA9-205ENST00000489695 EAPPQ56P03 285 aaPredicted RBP29.74■■■□□ 2.35
HOXA9-205ENST00000489695 ADAMTSL1Q8N6G6 1762 aa29.73■■■□□ 2.35
HOXA9-205ENST00000489695 EPHX2P34913 555 aa29.73■■■□□ 2.35
HOXA9-205ENST00000489695 HLFQ16534 295 aa29.73■■■□□ 2.35
HOXA9-205ENST00000489695 U2AF1L5P0DN76 240 aaPredicted RBP29.72■■■□□ 2.35
HOXA9-205ENST00000489695 IARSP41252 1262 aaKnown RBP29.72■■■□□ 2.35
HOXA9-205ENST00000489695 U2AF1Q01081 240 aaKnown RBP eCLIP29.72■■■□□ 2.35
HOXA9-205ENST00000489695 DCTN1Q14203 1278 aa29.72■■■□□ 2.35
HOXA9-205ENST00000489695 SNED1Q8TER0 1413 aa29.71■■■□□ 2.35
HOXA9-205ENST00000489695 PNMA8AQ86V59 439 aaPredicted RBP29.71■■■□□ 2.35
HOXA9-205ENST00000489695 SYNE4Q8N205 404 aa29.71■■■□□ 2.35
HOXA9-205ENST00000489695 FAM177BA6PVY3 158 aa29.7■■■□□ 2.35
HOXA9-205ENST00000489695 CRY2Q49AN0 593 aa29.7■■■□□ 2.35
HOXA9-205ENST00000489695 CLEC11AQ9Y240 323 aa29.7■■■□□ 2.35
HOXA9-205ENST00000489695 CTCFP49711 727 aaPredicted RBP29.69■■■□□ 2.34
HOXA9-205ENST00000489695 TAF7Q15545 349 aaPredicted RBP29.69■■■□□ 2.34
HOXA9-205ENST00000489695 GPC2Q8N158 579 aa29.69■■■□□ 2.34
HOXA9-205ENST00000489695 PSMD1Q99460 953 aa29.69■■■□□ 2.34
HOXA9-205ENST00000489695 RNF123Q5XPI4 1314 aa29.69■■■□□ 2.34
HOXA9-205ENST00000489695 AIDAQ96BJ3 306 aa29.68■■■□□ 2.34
HOXA9-205ENST00000489695 WBP1LQ9NX94 342 aa29.68■■■□□ 2.34
HOXA9-205ENST00000489695 GTF2E1P29083 439 aaPredicted RBP29.67■■■□□ 2.34
HOXA9-205ENST00000489695 CNTROBQ8N137 903 aa29.67■■■□□ 2.34
HOXA9-205ENST00000489695 RASSF10A6NK89 507 aa29.66■■■□□ 2.34
HOXA9-205ENST00000489695 PPP2R1AP30153 589 aa29.66■■■□□ 2.34
HOXA9-205ENST00000489695 ERVV-1B6SEH8 477 aa29.65■■■□□ 2.34
HOXA9-205ENST00000489695 MAP1SQ66K74 1059 aaPredicted RBP29.65■■■□□ 2.34
HOXA9-205ENST00000489695 NYXQ9GZU5 481 aa29.65■■■□□ 2.34
HOXA9-205ENST00000489695 CC2D2BQ6DHV5 1058 aa29.64■■■□□ 2.34
HOXA9-205ENST00000489695 JDP2Q8WYK2 163 aa29.64■■■□□ 2.34
HOXA9-205ENST00000489695 MIS18AQ9NYP9 233 aa29.64■■■□□ 2.34
HOXA9-205ENST00000489695 ABCC12Q96J65 1359 aa29.64■■■□□ 2.33
HOXA9-205ENST00000489695 DEFB115Q30KQ5 88 aa29.63■■■□□ 2.33
HOXA9-205ENST00000489695 HOXA10P31260 410 aaPredicted RBP29.62■■■□□ 2.33
HOXA9-205ENST00000489695 NUTM1Q86Y26 1132 aa29.62■■■□□ 2.33
HOXA9-205ENST00000489695 LAMB4A4D0S4 1761 aa29.6■■■□□ 2.33
HOXA9-205ENST00000489695 GRIPAP1Q4V328 841 aa29.6■■■□□ 2.33
HOXA9-205ENST00000489695 MAP3K15Q6ZN16 1313 aa29.6■■■□□ 2.33
HOXA9-205ENST00000489695 RIC1Q4ADV7 1423 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms