RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 PRKAR2BP31323 418 aa11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 IL6STP40189 918 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 APLP1P51693 650 aa11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 CCDC88AQ3V6T2 1871 aa11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 DLEC1Q9Y238 1755 aa11.2□□□□□ -0.62
ERGIC3-218ENST00000489071 CEMIPQ8WUJ3 1361 aa11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 H0YIN7 160 aa11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 NMRK2Q9NPI5 230 aa11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
ERGIC3-218ENST00000489071 ZC3H4Q9UPT8 1303 aaKnown RBP11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 BICDL1Q6ZP65 573 aa11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 RBM46Q8TBY0 533 aaKnown RBP11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 PLEKHF1Q96S99 279 aa11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 ZNF330Q9Y3S2 320 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-218ENST00000489071 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
ERGIC3-218ENST00000489071 PDE6BP35913 854 aa11.17□□□□□ -0.62
ERGIC3-218ENST00000489071 TBC1D9BQ66K14 1250 aa11.17□□□□□ -0.62
ERGIC3-218ENST00000489071 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
ERGIC3-218ENST00000489071 ZNF521Q96K83 1311 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 APAF1O14727 1248 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 A1BGP04217 495 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 LMNB1P20700 586 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 FSTL1Q12841 308 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 SETDB2Q96T68 719 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 BRIP1Q9BX63 1249 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 SCN7AQ01118 1682 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 TNRC6CQ9HCJ0 1690 aaKnown RBP11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
ERGIC3-218ENST00000489071 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 NPHP1O15259 732 aa11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 RASSF7Q02833 373 aa11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 WDR63Q8IWG1 891 aa11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 ZNF622Q969S3 477 aaKnown RBP eCLIP11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
ERGIC3-218ENST00000489071 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 KCNQ3O43525 872 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 CAMTA2O94983 1202 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 ST5P78524 1137 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 LMOD3Q0VAK6 560 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 PRR5LQ6MZQ0 368 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 USP16Q9Y5T5 823 aa11.14□□□□□ -0.63
ERGIC3-218ENST00000489071 IL16Q14005 1332 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 MCM10Q7L590 875 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 ZNF652Q9Y2D9 606 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 BCORQ6W2J9 1755 aa11.13□□□□□ -0.63
ERGIC3-218ENST00000489071 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 E9PSI1 815 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 RGL2O15211 777 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 TMPOP42166 694 aaKnown RBP11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 STYK1Q6J9G0 422 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 WWC1Q8IX03 1113 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 SMC1BQ8NDV3 1235 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 CACNA1SQ13698 1873 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
ERGIC3-218ENST00000489071 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 NFKBIEO00221 500 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 C21orf2O43822 256 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 TRMT2AQ8IZ69 625 aaKnown RBP11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 DNAJC5GQ8N7S2 189 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 MASTLQ96GX5 879 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 TIAM2Q8IVF5 1701 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 SLX4Q8IY92 1834 aa11.11□□□□□ -0.63
ERGIC3-218ENST00000489071 COL11A2P13942 1736 aaPredicted RBP11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 SRGNP10124 158 aa11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 PRELPP51888 382 aa11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 ARFGEF2Q9Y6D5 1785 aa11.1□□□□□ -0.63
ERGIC3-218ENST00000489071 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
ERGIC3-218ENST00000489071 PRAMEF22A3QJZ6 481 aa11.09□□□□□ -0.63
ERGIC3-218ENST00000489071 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
ERGIC3-218ENST00000489071 RIPK4P57078 832 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms