RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 DZIP3Q86Y13 1208 aaKnown RBP14.49□□□□□ -0.09
YIPF3-207ENST00000488966 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
YIPF3-207ENST00000488966 SCN7AQ01118 1682 aa14.49□□□□□ -0.09
YIPF3-207ENST00000488966 VIRMAQ69YN4 1812 aaKnown RBP14.48□□□□□ -0.09
YIPF3-207ENST00000488966 PRAMEF22A3QJZ6 481 aa14.48□□□□□ -0.09
YIPF3-207ENST00000488966 PRKAR2BP31323 418 aa14.48□□□□□ -0.09
YIPF3-207ENST00000488966 CHADLQ6NUI6 762 aa14.48□□□□□ -0.09
YIPF3-207ENST00000488966 MASTLQ96GX5 879 aa14.48□□□□□ -0.09
YIPF3-207ENST00000488966 COL11A2P13942 1736 aaPredicted RBP14.48□□□□□ -0.09
YIPF3-207ENST00000488966 RSPH6AQ9H0K4 717 aa14.47□□□□□ -0.09
YIPF3-207ENST00000488966 MKRN1Q9UHC7 482 aaKnown RBP14.47□□□□□ -0.09
YIPF3-207ENST00000488966 SOGA3Q5TF21 947 aa14.46□□□□□ -0.09
YIPF3-207ENST00000488966 NBPF5PQ86XG9 351 aaPredicted RBP14.46□□□□□ -0.09
YIPF3-207ENST00000488966 C7orf43Q8WVR3 580 aa14.46□□□□□ -0.09
YIPF3-207ENST00000488966 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
YIPF3-207ENST00000488966 FER1L6Q2WGJ9 1857 aa14.45□□□□□ -0.1
YIPF3-207ENST00000488966 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
YIPF3-207ENST00000488966 SIPA1L3O60292 1781 aaPredicted RBP14.45□□□□□ -0.1
YIPF3-207ENST00000488966 CCDC88AQ3V6T2 1871 aa14.44□□□□□ -0.1
YIPF3-207ENST00000488966 PCNTO95613 3336 aa14.44□□□□□ -0.1
YIPF3-207ENST00000488966 NBPF26B4DH59 902 aa14.44□□□□□ -0.1
YIPF3-207ENST00000488966 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
YIPF3-207ENST00000488966 CCDC93Q567U6 631 aa14.44□□□□□ -0.1
YIPF3-207ENST00000488966 NBPF10Q6P3W6 841 aaKnown RBP14.44□□□□□ -0.1
YIPF3-207ENST00000488966 NBPF15Q8N660 670 aa14.44□□□□□ -0.1
YIPF3-207ENST00000488966 SLX4Q8IY92 1834 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 KLRG2A4D1S0 409 aaPredicted RBP14.43□□□□□ -0.1
YIPF3-207ENST00000488966 IQCA1LA6NCM1 817 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 NPR1P16066 1061 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 OLFM4Q6UX06 510 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 MCM10Q7L590 875 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 LDHDQ86WU2 507 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 CFAP53Q96M91 514 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 TAF1DQ9H5J8 278 aaPredicted RBP14.43□□□□□ -0.1
YIPF3-207ENST00000488966 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
YIPF3-207ENST00000488966 ZNF652Q9Y2D9 606 aa14.43□□□□□ -0.1
YIPF3-207ENST00000488966 PASKQ96RG2 1323 aa14.42□□□□□ -0.1
YIPF3-207ENST00000488966 DCTN1Q14203 1278 aa14.42□□□□□ -0.1
YIPF3-207ENST00000488966 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
YIPF3-207ENST00000488966 NIP7Q9Y221 180 aaKnown RBP eCLIP14.42□□□□□ -0.1
YIPF3-207ENST00000488966 ZNF541Q9H0D2 1346 aa14.41□□□□□ -0.1
YIPF3-207ENST00000488966 FAM177BA6PVY3 158 aa14.41□□□□□ -0.1
YIPF3-207ENST00000488966 U2AF1L5P0DN76 240 aaPredicted RBP14.41□□□□□ -0.1
YIPF3-207ENST00000488966 U2AF1Q01081 240 aaKnown RBP eCLIP14.41□□□□□ -0.1
YIPF3-207ENST00000488966 FKBP4Q02790 459 aaKnown RBP eCLIP14.41□□□□□ -0.1
YIPF3-207ENST00000488966 TPTE2Q6XPS3 522 aa14.41□□□□□ -0.1
YIPF3-207ENST00000488966 RTF1Q92541 710 aaKnown RBP14.41□□□□□ -0.1
YIPF3-207ENST00000488966 NUDCQ9Y266 331 aa14.41□□□□□ -0.1
YIPF3-207ENST00000488966 CNTNAP1P78357 1384 aa14.41□□□□□ -0.1
YIPF3-207ENST00000488966 ITGBL1O95965 494 aaPredicted RBP14.4□□□□□ -0.1
YIPF3-207ENST00000488966 HLFQ16534 295 aa14.4□□□□□ -0.1
YIPF3-207ENST00000488966 BCORQ6W2J9 1755 aa14.39□□□□□ -0.11
YIPF3-207ENST00000488966 DICER1Q9UPY3 1922 aaKnown RBP14.39□□□□□ -0.11
YIPF3-207ENST00000488966 RGL2O15211 777 aa14.39□□□□□ -0.11
YIPF3-207ENST00000488966 FOXN1O15353 648 aa14.39□□□□□ -0.11
YIPF3-207ENST00000488966 EAPPQ56P03 285 aaPredicted RBP14.39□□□□□ -0.11
YIPF3-207ENST00000488966 RTKN2Q8IZC4 609 aa14.39□□□□□ -0.11
YIPF3-207ENST00000488966 PPP2R1AP30153 589 aa14.38□□□□□ -0.11
YIPF3-207ENST00000488966 SYNE4Q8N205 404 aa14.38□□□□□ -0.11
YIPF3-207ENST00000488966 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
YIPF3-207ENST00000488966 HACL1Q9UJ83 578 aa14.38□□□□□ -0.11
YIPF3-207ENST00000488966 TMEM88BA6NKF7 163 aa14.37□□□□□ -0.11
YIPF3-207ENST00000488966 HTATSF1O43719 755 aaKnown RBP14.37□□□□□ -0.11
YIPF3-207ENST00000488966 EPHX2P34913 555 aa14.37□□□□□ -0.11
YIPF3-207ENST00000488966 IARSP41252 1262 aaKnown RBP14.37□□□□□ -0.11
YIPF3-207ENST00000488966 VEGFBP49765 207 aa14.37□□□□□ -0.11
YIPF3-207ENST00000488966 TAF7Q15545 349 aaPredicted RBP14.37□□□□□ -0.11
YIPF3-207ENST00000488966 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
YIPF3-207ENST00000488966 RNF123Q5XPI4 1314 aa14.37□□□□□ -0.11
YIPF3-207ENST00000488966 FZD9O00144 591 aa14.36□□□□□ -0.11
YIPF3-207ENST00000488966 GTF2E1P29083 439 aaPredicted RBP14.36□□□□□ -0.11
YIPF3-207ENST00000488966 ALDH1B1P30837 517 aa14.36□□□□□ -0.11
YIPF3-207ENST00000488966 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
YIPF3-207ENST00000488966 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
YIPF3-207ENST00000488966 ARFGEF2Q9Y6D5 1785 aa14.36□□□□□ -0.11
YIPF3-207ENST00000488966 ABCC12Q96J65 1359 aa14.35□□□□□ -0.11
YIPF3-207ENST00000488966 MAP1SQ66K74 1059 aaPredicted RBP14.35□□□□□ -0.11
YIPF3-207ENST00000488966 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
YIPF3-207ENST00000488966 PRDM10Q9NQV6 1147 aa14.35□□□□□ -0.11
YIPF3-207ENST00000488966 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
YIPF3-207ENST00000488966 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
YIPF3-207ENST00000488966 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
YIPF3-207ENST00000488966 PNMA8AQ86V59 439 aaPredicted RBP14.34□□□□□ -0.11
YIPF3-207ENST00000488966 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.12
YIPF3-207ENST00000488966 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 SLC51AQ86UW1 340 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 GPC2Q8N158 579 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 PSMD1Q99460 953 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 NYXQ9GZU5 481 aa14.33□□□□□ -0.12
YIPF3-207ENST00000488966 SCN4AP35499 1836 aa14.32□□□□□ -0.12
YIPF3-207ENST00000488966 RASSF10A6NK89 507 aa14.32□□□□□ -0.12
YIPF3-207ENST00000488966 JDP2Q8WYK2 163 aa14.32□□□□□ -0.12
YIPF3-207ENST00000488966 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
YIPF3-207ENST00000488966 RRP7AQ9Y3A4 280 aaKnown RBP14.32□□□□□ -0.12
YIPF3-207ENST00000488966 MAP3K15Q6ZN16 1313 aa14.32□□□□□ -0.12
YIPF3-207ENST00000488966 COL4A5P29400 1685 aa14.31□□□□□ -0.12
YIPF3-207ENST00000488966 GPTP24298 496 aa14.31□□□□□ -0.12
YIPF3-207ENST00000488966 HOXA10P31260 410 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms