RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 SSH3Q8TE77 659 aa13.98□□□□□ -0.17
HUWE1-212ENST00000488459 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
HUWE1-212ENST00000488459 LRP6O75581 1613 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 A0A087WZG4 1122 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 KCNQ2O43526 872 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
HUWE1-212ENST00000488459 ATP6V1AP38606 617 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 POLA2Q14181 598 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 PLEKHM2Q8IWE5 1019 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
HUWE1-212ENST00000488459 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
HUWE1-212ENST00000488459 NRAPQ86VF7 1730 aa13.96□□□□□ -0.17
HUWE1-212ENST00000488459 C5P01031 1676 aa13.96□□□□□ -0.17
HUWE1-212ENST00000488459 RAB11FIP3O75154 756 aa13.96□□□□□ -0.17
HUWE1-212ENST00000488459 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.17
HUWE1-212ENST00000488459 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
HUWE1-212ENST00000488459 GJD4Q96KN9 370 aaPredicted RBP13.96□□□□□ -0.17
HUWE1-212ENST00000488459 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.17
HUWE1-212ENST00000488459 CWC25Q9NXE8 425 aaPredicted RBP13.96□□□□□ -0.17
HUWE1-212ENST00000488459 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
HUWE1-212ENST00000488459 UTYO14607 1347 aa13.95□□□□□ -0.18
HUWE1-212ENST00000488459 VIRMAQ69YN4 1812 aaKnown RBP13.95□□□□□ -0.18
HUWE1-212ENST00000488459 HSP90AB4PQ58FF6 505 aa13.95□□□□□ -0.18
HUWE1-212ENST00000488459 RTL5Q5HYW3 569 aaPredicted RBP13.95□□□□□ -0.18
HUWE1-212ENST00000488459 UPF2Q9HAU5 1272 aaKnown RBP13.95□□□□□ -0.18
HUWE1-212ENST00000488459 IL1RAPL2Q9NP60 686 aa13.95□□□□□ -0.18
HUWE1-212ENST00000488459 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
HUWE1-212ENST00000488459 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
HUWE1-212ENST00000488459 SEC24BO95487 1268 aa13.94□□□□□ -0.18
HUWE1-212ENST00000488459 SIK1P57059 783 aa13.94□□□□□ -0.18
HUWE1-212ENST00000488459 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
HUWE1-212ENST00000488459 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
HUWE1-212ENST00000488459 IBTKQ9P2D0 1353 aaPredicted RBP13.94□□□□□ -0.18
HUWE1-212ENST00000488459 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
HUWE1-212ENST00000488459 G3BP1Q13283 466 aaKnown RBP eCLIP13.93□□□□□ -0.18
HUWE1-212ENST00000488459 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
HUWE1-212ENST00000488459 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
HUWE1-212ENST00000488459 QTRT2Q9H974 415 aaKnown RBP13.93□□□□□ -0.18
HUWE1-212ENST00000488459 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
HUWE1-212ENST00000488459 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
HUWE1-212ENST00000488459 CHMP3Q9Y3E7 222 aa13.93□□□□□ -0.18
HUWE1-212ENST00000488459 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
HUWE1-212ENST00000488459 H7C1W4 665 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 MFAP1P55081 439 aaKnown RBP13.92□□□□□ -0.18
HUWE1-212ENST00000488459 MTX1Q13505 466 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 NUTM1Q86Y26 1132 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 KIF1BPQ96EK5 621 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 KAZALD1Q96I82 304 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 CCDC87Q9NVE4 849 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 TBC1D2BQ9UPU7 963 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 PALLDQ8WX93 1383 aa13.92□□□□□ -0.18
HUWE1-212ENST00000488459 CACNA1FO60840 1977 aa13.91□□□□□ -0.18
HUWE1-212ENST00000488459 GPTP24298 496 aa13.91□□□□□ -0.18
HUWE1-212ENST00000488459 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
HUWE1-212ENST00000488459 ITPK1Q13572 414 aa13.91□□□□□ -0.18
HUWE1-212ENST00000488459 DZIP3Q86Y13 1208 aaKnown RBP13.91□□□□□ -0.18
HUWE1-212ENST00000488459 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
HUWE1-212ENST00000488459 SIL1Q9H173 461 aa13.91□□□□□ -0.18
HUWE1-212ENST00000488459 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.18
HUWE1-212ENST00000488459 MX1P20591 662 aa13.9□□□□□ -0.18
HUWE1-212ENST00000488459 IL6STP40189 918 aaPredicted RBP13.9□□□□□ -0.18
HUWE1-212ENST00000488459 PDE1AP54750 535 aa13.9□□□□□ -0.18
HUWE1-212ENST00000488459 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
HUWE1-212ENST00000488459 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
HUWE1-212ENST00000488459 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.18
HUWE1-212ENST00000488459 IPO9Q96P70 1041 aaKnown RBP13.9□□□□□ -0.18
HUWE1-212ENST00000488459 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
HUWE1-212ENST00000488459 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
HUWE1-212ENST00000488459 PAPPAQ13219 1627 aa13.9□□□□□ -0.19
HUWE1-212ENST00000488459 GLI3P10071 1580 aa13.89□□□□□ -0.19
HUWE1-212ENST00000488459 CDC45O75419 566 aa13.89□□□□□ -0.19
HUWE1-212ENST00000488459 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
HUWE1-212ENST00000488459 HLFQ16534 295 aa13.89□□□□□ -0.19
HUWE1-212ENST00000488459 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
HUWE1-212ENST00000488459 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
HUWE1-212ENST00000488459 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
HUWE1-212ENST00000488459 CASP7P55210 303 aa13.88□□□□□ -0.19
HUWE1-212ENST00000488459 KCNQ4P56696 695 aa13.88□□□□□ -0.19
HUWE1-212ENST00000488459 GIGYF2Q6Y7W6 1299 aaKnown RBP13.88□□□□□ -0.19
HUWE1-212ENST00000488459 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
HUWE1-212ENST00000488459 CLASRPQ8N2M8 674 aaKnown RBP13.88□□□□□ -0.19
HUWE1-212ENST00000488459 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
HUWE1-212ENST00000488459 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
HUWE1-212ENST00000488459 DAXXQ9UER7 740 aaPredicted RBP13.88□□□□□ -0.19
HUWE1-212ENST00000488459 UBR2Q8IWV8 1755 aa13.87□□□□□ -0.19
HUWE1-212ENST00000488459 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
HUWE1-212ENST00000488459 IFIT2P09913 472 aaKnown RBP13.87□□□□□ -0.19
HUWE1-212ENST00000488459 SDSP20132 328 aa13.87□□□□□ -0.19
HUWE1-212ENST00000488459 FOXO4P98177 505 aa13.87□□□□□ -0.19
HUWE1-212ENST00000488459 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
HUWE1-212ENST00000488459 TBC1D9Q6ZT07 1266 aa13.87□□□□□ -0.19
HUWE1-212ENST00000488459 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
HUWE1-212ENST00000488459 ERVV-1B6SEH8 477 aa13.86□□□□□ -0.19
HUWE1-212ENST00000488459 EIF5P55010 431 aaKnown RBP13.86□□□□□ -0.19
HUWE1-212ENST00000488459 TRIM28Q13263 835 aaKnown RBP13.86□□□□□ -0.19
HUWE1-212ENST00000488459 AACSQ86V21 672 aa13.86□□□□□ -0.19
HUWE1-212ENST00000488459 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms