RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 ZNF790Q6PG37 636 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
LCN2-206ENST00000488391 LDHDQ86WU2 507 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 MIER1Q8N108 512 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 IL17REQ8NFR9 667 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 MASTLQ96GX5 879 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 COL11A2P13942 1736 aaPredicted RBP14.66□□□□□ -0.06
LCN2-206ENST00000488391 HEG1Q9ULI3 1381 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 TMEM88BA6NKF7 163 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 ANP32CO43423 234 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 DIAPH1O60610 1272 aaKnown RBP14.65□□□□□ -0.06
LCN2-206ENST00000488391 CAMTA2O94983 1202 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 ITGBL1O95965 494 aaPredicted RBP14.65□□□□□ -0.06
LCN2-206ENST00000488391 LBX1P52954 281 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 ST5P78524 1137 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 AMER1Q5JTC6 1135 aaPredicted RBP14.65□□□□□ -0.06
LCN2-206ENST00000488391 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 CACNA1SQ13698 1873 aa14.65□□□□□ -0.06
LCN2-206ENST00000488391 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
LCN2-206ENST00000488391 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
LCN2-206ENST00000488391 UBR2Q8IWV8 1755 aa14.64□□□□□ -0.07
LCN2-206ENST00000488391 KCNQ3O43525 872 aa14.63□□□□□ -0.07
LCN2-206ENST00000488391 PIP4K2AP48426 406 aaPredicted RBP14.63□□□□□ -0.07
LCN2-206ENST00000488391 DZIP3Q86Y13 1208 aaKnown RBP14.63□□□□□ -0.07
LCN2-206ENST00000488391 C7orf43Q8WVR3 580 aa14.63□□□□□ -0.07
LCN2-206ENST00000488391 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
LCN2-206ENST00000488391 WBP1LQ9NX94 342 aa14.63□□□□□ -0.07
LCN2-206ENST00000488391 GNAT3A8MTJ3 354 aa14.62□□□□□ -0.07
LCN2-206ENST00000488391 CCDC93Q567U6 631 aa14.62□□□□□ -0.07
LCN2-206ENST00000488391 OLFM4Q6UX06 510 aa14.62□□□□□ -0.07
LCN2-206ENST00000488391 NBPF5PQ86XG9 351 aaPredicted RBP14.62□□□□□ -0.07
LCN2-206ENST00000488391 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
LCN2-206ENST00000488391 HACL1Q9UJ83 578 aa14.62□□□□□ -0.07
LCN2-206ENST00000488391 ZNF541Q9H0D2 1346 aa14.62□□□□□ -0.07
LCN2-206ENST00000488391 U2SURPO15042 1029 aaKnown RBP14.61□□□□□ -0.07
LCN2-206ENST00000488391 DEFB115Q30KQ5 88 aa14.61□□□□□ -0.07
LCN2-206ENST00000488391 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
LCN2-206ENST00000488391 USP16Q9Y5T5 823 aa14.61□□□□□ -0.07
LCN2-206ENST00000488391 SCN4AP35499 1836 aa14.61□□□□□ -0.07
LCN2-206ENST00000488391 NPR1P16066 1061 aa14.6□□□□□ -0.07
LCN2-206ENST00000488391 EPHX2P34913 555 aa14.6□□□□□ -0.07
LCN2-206ENST00000488391 FKBP4Q02790 459 aaKnown RBP eCLIP14.6□□□□□ -0.07
LCN2-206ENST00000488391 CNGB1Q14028 1251 aaPredicted RBP14.6□□□□□ -0.07
LCN2-206ENST00000488391 CC2D1BQ5T0F9 858 aaKnown RBP14.6□□□□□ -0.07
LCN2-206ENST00000488391 CNTROBQ8N137 903 aa14.6□□□□□ -0.07
LCN2-206ENST00000488391 SCN7AQ01118 1682 aa14.6□□□□□ -0.07
LCN2-206ENST00000488391 FAM177BA6PVY3 158 aa14.59□□□□□ -0.07
LCN2-206ENST00000488391 BTBD11A6QL63 1104 aa14.59□□□□□ -0.07
LCN2-206ENST00000488391 CCER2I3L3R5 266 aa14.59□□□□□ -0.07
LCN2-206ENST00000488391 GAS2L2Q8NHY3 880 aa14.59□□□□□ -0.07
LCN2-206ENST00000488391 PRAMEF22A3QJZ6 481 aa14.58□□□□□ -0.08
LCN2-206ENST00000488391 HSPA8P11142 646 aaKnown RBP14.58□□□□□ -0.08
LCN2-206ENST00000488391 SYNE4Q8N205 404 aa14.58□□□□□ -0.08
LCN2-206ENST00000488391 ABHD8Q96I13 439 aa14.58□□□□□ -0.08
LCN2-206ENST00000488391 ABT1Q9ULW3 272 aaKnown RBP14.58□□□□□ -0.08
LCN2-206ENST00000488391 RNF123Q5XPI4 1314 aa14.58□□□□□ -0.08
LCN2-206ENST00000488391 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
LCN2-206ENST00000488391 RASSF10A6NK89 507 aa14.57□□□□□ -0.08
LCN2-206ENST00000488391 PER1O15534 1290 aaPredicted RBP14.57□□□□□ -0.08
LCN2-206ENST00000488391 CLEC4GQ6UXB4 293 aa14.57□□□□□ -0.08
LCN2-206ENST00000488391 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
LCN2-206ENST00000488391 PNMA8AQ86V59 439 aaPredicted RBP14.57□□□□□ -0.08
LCN2-206ENST00000488391 RTKN2Q8IZC4 609 aa14.57□□□□□ -0.08
LCN2-206ENST00000488391 PRKRIP1Q9H875 184 aaPredicted RBP14.57□□□□□ -0.08
LCN2-206ENST00000488391 ARFGEF2Q9Y6D5 1785 aa14.56□□□□□ -0.08
LCN2-206ENST00000488391 KLRG2A4D1S0 409 aaPredicted RBP14.56□□□□□ -0.08
LCN2-206ENST00000488391 FZD9O00144 591 aa14.56□□□□□ -0.08
LCN2-206ENST00000488391 IARSP41252 1262 aaKnown RBP14.56□□□□□ -0.08
LCN2-206ENST00000488391 MAP2K1Q02750 393 aaPredicted RBP14.56□□□□□ -0.08
LCN2-206ENST00000488391 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
LCN2-206ENST00000488391 PHACTR3Q96KR7 559 aa14.56□□□□□ -0.08
LCN2-206ENST00000488391 NIP7Q9Y221 180 aaKnown RBP eCLIP14.56□□□□□ -0.08
LCN2-206ENST00000488391 FMR1Q06787 632 aaKnown RBP eCLIP14.55□□□□□ -0.08
LCN2-206ENST00000488391 ZNF652Q9Y2D9 606 aa14.55□□□□□ -0.08
LCN2-206ENST00000488391 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
LCN2-206ENST00000488391 NPC1L1Q9UHC9 1359 aa14.55□□□□□ -0.08
LCN2-206ENST00000488391 SIPA1L3O60292 1781 aaPredicted RBP14.55□□□□□ -0.08
LCN2-206ENST00000488391 SLC34A2O95436 690 aa14.54□□□□□ -0.08
LCN2-206ENST00000488391 GTF2E1P29083 439 aaPredicted RBP14.54□□□□□ -0.08
LCN2-206ENST00000488391 ALDH1B1P30837 517 aa14.54□□□□□ -0.08
LCN2-206ENST00000488391 GRM1Q13255 1194 aa14.54□□□□□ -0.08
LCN2-206ENST00000488391 GPC2Q8N158 579 aa14.54□□□□□ -0.08
LCN2-206ENST00000488391 CEMIPQ8WUJ3 1361 aa14.53□□□□□ -0.08
LCN2-206ENST00000488391 CCDC85CA6NKD9 419 aa14.53□□□□□ -0.08
LCN2-206ENST00000488391 NBPF26B4DH59 902 aa14.53□□□□□ -0.08
LCN2-206ENST00000488391 SNRPA1P09661 255 aaKnown RBP14.53□□□□□ -0.08
LCN2-206ENST00000488391 NBPF10Q6P3W6 841 aaKnown RBP14.53□□□□□ -0.08
LCN2-206ENST00000488391 PAXIP1Q6ZW49 1069 aaPredicted RBP14.53□□□□□ -0.08
LCN2-206ENST00000488391 NBPF15Q8N660 670 aa14.53□□□□□ -0.08
LCN2-206ENST00000488391 JDP2Q8WYK2 163 aa14.53□□□□□ -0.08
LCN2-206ENST00000488391 DDX21Q9NR30 783 aaKnown RBP eCLIP14.53□□□□□ -0.08
LCN2-206ENST00000488391 BCORQ6W2J9 1755 aa14.52□□□□□ -0.08
LCN2-206ENST00000488391 PRKAR2BP31323 418 aa14.52□□□□□ -0.09
LCN2-206ENST00000488391 RALBP1Q15311 655 aa14.52□□□□□ -0.09
LCN2-206ENST00000488391 HLFQ16534 295 aa14.52□□□□□ -0.09
LCN2-206ENST00000488391 ADAMTSL1Q8N6G6 1762 aa14.52□□□□□ -0.09
LCN2-206ENST00000488391 EPS15P42566 896 aa14.51□□□□□ -0.09
LCN2-206ENST00000488391 EIF6P56537 245 aaKnown RBP14.51□□□□□ -0.09
LCN2-206ENST00000488391 CYP4F22Q6NT55 531 aa14.51□□□□□ -0.09
LCN2-206ENST00000488391 MCM10Q7L590 875 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms