RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
CDHR3-213ENST00000488386 PRR36Q9H6K5 1346 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 GDF9O60383 454 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 FOXC1Q12948 553 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 NEUROD1Q13562 356 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 SH3BP5LQ7L8J4 393 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 SIRT1Q96EB6 747 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 NGLY1Q96IV0 654 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 GTF3C3Q9Y5Q9 886 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 NDUFB9Q9Y6M9 179 aa8.55□□□□□ -1.04
CDHR3-213ENST00000488386 ADGRB2O60241 1585 aa8.54□□□□□ -1.04
CDHR3-213ENST00000488386 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
CDHR3-213ENST00000488386 RXRBP28702 533 aa8.54□□□□□ -1.04
CDHR3-213ENST00000488386 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
CDHR3-213ENST00000488386 NBPF14Q5TI25 921 aa8.54□□□□□ -1.04
CDHR3-213ENST00000488386 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
CDHR3-213ENST00000488386 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
CDHR3-213ENST00000488386 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
CDHR3-213ENST00000488386 WNT7AO00755 349 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 FLIIQ13045 1269 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 IRF5Q13568 498 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 ARMC2Q8NEN0 867 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 QTRT2Q9H974 415 aaKnown RBP8.53□□□□□ -1.04
CDHR3-213ENST00000488386 USP21Q9UK80 565 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 COG6Q9Y2V7 657 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 RGS12O14924 1447 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 SPATA31A3Q5VYP0 1347 aa8.53□□□□□ -1.04
CDHR3-213ENST00000488386 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
CDHR3-213ENST00000488386 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
CDHR3-213ENST00000488386 ABCA3Q99758 1704 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-213ENST00000488386 TULP4Q9NRJ4 1543 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-213ENST00000488386 PSME1Q06323 249 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.05
CDHR3-213ENST00000488386 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 CARD14Q9BXL6 1004 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 TLL2Q9Y6L7 1015 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 TNS3Q68CZ2 1445 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
CDHR3-213ENST00000488386 APBB1O00213 710 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 SIAH2O43255 324 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 FBXO45P0C2W1 286 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 PRR20EP86478 221 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 PRR20CP86479 221 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 PRR20DP86480 221 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 PRR20BP86481 221 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 PRR20AP86496 221 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 AGERQ15109 404 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 ANKARQ7Z5J8 1434 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 EHBP1Q8NDI1 1231 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 ATP7BP35670 1465 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 BCL9LQ86UU0 1499 aa8.5□□□□□ -1.05
CDHR3-213ENST00000488386 ABL2P42684 1182 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
CDHR3-213ENST00000488386 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 BPHLQ86WA6 291 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-213ENST00000488386 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
CDHR3-213ENST00000488386 ARHGAP9Q9BRR9 750 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 TRPM1Q7Z4N2 1603 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 PLCH1Q4KWH8 1693 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 QRICH2Q9H0J4 1663 aa8.49□□□□□ -1.05
CDHR3-213ENST00000488386 ATRNO75882 1429 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 NBPF8Q3BBV2 869 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 ERFEQ4G0M1 354 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-213ENST00000488386 PNMA1Q8ND90 353 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 NGDNQ8NEJ9 315 aaKnown RBP8.48□□□□□ -1.05
CDHR3-213ENST00000488386 TOR4AQ9NXH8 423 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-213ENST00000488386 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 TOPAZ1Q8N9V7 1692 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 ALS2Q96Q42 1657 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 ITSN1Q15811 1721 aa8.48□□□□□ -1.05
CDHR3-213ENST00000488386 ZBBXA8MT70 800 aa8.47□□□□□ -1.05
CDHR3-213ENST00000488386 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
CDHR3-213ENST00000488386 PTK2Q05397 1052 aa8.47□□□□□ -1.05
CDHR3-213ENST00000488386 ADAM32Q8TC27 787 aa8.47□□□□□ -1.05
CDHR3-213ENST00000488386 GLI3P10071 1580 aa8.47□□□□□ -1.05
CDHR3-213ENST00000488386 SBNO1A3KN83 1393 aa8.47□□□□□ -1.05
CDHR3-213ENST00000488386 CRYBG1Q9Y4K1 1723 aa8.46□□□□□ -1.05
CDHR3-213ENST00000488386 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
CDHR3-213ENST00000488386 SLIT2O94813 1529 aa8.46□□□□□ -1.05
CDHR3-213ENST00000488386 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
CDHR3-213ENST00000488386 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
CDHR3-213ENST00000488386 CENPJQ9HC77 1338 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-213ENST00000488386 GPRASP1Q5JY77 1395 aa8.46□□□□□ -1.06
CDHR3-213ENST00000488386 FAM83GA6ND36 823 aa8.45□□□□□ -1.06
CDHR3-213ENST00000488386 J3QL48 77 aa8.45□□□□□ -1.06
CDHR3-213ENST00000488386 UNC5CLQ8IV45 518 aa8.45□□□□□ -1.06
CDHR3-213ENST00000488386 CCDC9Q9Y3X0 531 aaKnown RBP8.45□□□□□ -1.06
CDHR3-213ENST00000488386 ACEP12821 1306 aa8.45□□□□□ -1.06
CDHR3-213ENST00000488386 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.45□□□□□ -1.06
CDHR3-213ENST00000488386 ARHGEF10O15013 1369 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms