RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 AHDC1Q5TGY3 1603 aaPredicted RBP19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 PI4K2BQ8TCG2 481 aa19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 ESYT1Q9BSJ8 1104 aa19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 STRN4Q9NRL3 753 aa19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 TTC41PQ6P2S7 1318 aa19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 K7ELQ4 463 aaPredicted RBP19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 EPB41L2O43491 1005 aaKnown RBP19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 CHMLP26374 656 aa19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 NUTM1Q86Y26 1132 aa19.59■□□□□ 0.73
RAPGEF3-211ENST00000488250 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.73
RAPGEF3-211ENST00000488250 BICC1Q9H694 974 aaKnown RBP19.58■□□□□ 0.72
RAPGEF3-211ENST00000488250 COL14A1Q05707 1796 aaKnown RBP19.58■□□□□ 0.72
RAPGEF3-211ENST00000488250 ARFGEF2Q9Y6D5 1785 aa19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 MYD88Q99836 296 aa19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 RBM42Q9BTD8 480 aaKnown RBP19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 CIZ1Q9ULV3 898 aaPredicted RBP19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 TRIM6-TRIM34B2RNG4 842 aa19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 CD2BP2O95400 341 aaKnown RBP19.57■□□□□ 0.72
RAPGEF3-211ENST00000488250 OS9Q13438 667 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-211ENST00000488250 CLASRPQ8N2M8 674 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-211ENST00000488250 UNC5CLQ8IV45 518 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 SPRYD3Q8NCJ5 442 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 RILPL2Q969X0 211 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 ROBO1Q9Y6N7 1651 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 TOGARAM1Q9Y4F4 1720 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 DDX54Q8TDD1 881 aaKnown RBP19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 IL17RAQ96F46 866 aa19.55■□□□□ 0.72
RAPGEF3-211ENST00000488250 DISP2A7MBM2 1401 aa19.54■□□□□ 0.72
RAPGEF3-211ENST00000488250 GLRX3O76003 335 aaKnown RBP19.53■□□□□ 0.72
RAPGEF3-211ENST00000488250 BTG4Q9NY30 223 aa19.53■□□□□ 0.72
RAPGEF3-211ENST00000488250 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
RAPGEF3-211ENST00000488250 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 ANAPC15P60006 121 aa19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 RABL6Q3YEC7 729 aaPredicted RBP19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 CNTROBQ8N137 903 aa19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 ECHDC1Q9NTX5 307 aa19.52■□□□□ 0.72
RAPGEF3-211ENST00000488250 PLCH1Q4KWH8 1693 aa19.52■□□□□ 0.71
RAPGEF3-211ENST00000488250 NUP188Q5SRE5 1749 aa19.51■□□□□ 0.71
RAPGEF3-211ENST00000488250 G3BP1Q13283 466 aaKnown RBP eCLIP19.51■□□□□ 0.71
RAPGEF3-211ENST00000488250 AK9Q5TCS8 1911 aa19.51■□□□□ 0.71
RAPGEF3-211ENST00000488250 SASH1O94885 1247 aa19.51■□□□□ 0.71
RAPGEF3-211ENST00000488250 IL27Q8NEV9 243 aa19.51■□□□□ 0.71
RAPGEF3-211ENST00000488250 COPRSQ9NQ92 184 aa19.51■□□□□ 0.71
RAPGEF3-211ENST00000488250 COL16A1Q07092 1604 aaPredicted RBP19.5■□□□□ 0.71
RAPGEF3-211ENST00000488250 ST18O60284 1047 aa19.5■□□□□ 0.71
RAPGEF3-211ENST00000488250 MCCP23508 829 aa19.5■□□□□ 0.71
RAPGEF3-211ENST00000488250 CASP7P55210 303 aa19.5■□□□□ 0.71
RAPGEF3-211ENST00000488250 EPHA10Q5JZY3 1008 aa19.5■□□□□ 0.71
RAPGEF3-211ENST00000488250 TMOD3Q9NYL9 352 aa19.5■□□□□ 0.71
RAPGEF3-211ENST00000488250 LRP6O75581 1613 aa19.49■□□□□ 0.71
RAPGEF3-211ENST00000488250 TOM1O60784 492 aa19.49■□□□□ 0.71
RAPGEF3-211ENST00000488250 IFIT2P09913 472 aaKnown RBP19.49■□□□□ 0.71
RAPGEF3-211ENST00000488250 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
RAPGEF3-211ENST00000488250 CERKQ8TCT0 537 aa19.49■□□□□ 0.71
RAPGEF3-211ENST00000488250 RFX5P48382 616 aaPredicted RBP19.48■□□□□ 0.71
RAPGEF3-211ENST00000488250 GSE1Q14687 1217 aa19.48■□□□□ 0.71
RAPGEF3-211ENST00000488250 TEX13AQ9BXU3 409 aaPredicted RBP19.48■□□□□ 0.71
RAPGEF3-211ENST00000488250 H7C1W4 665 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 AACSQ86V21 672 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 ANO2Q9NQ90 1003 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 A0A087WZG4 1122 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 SGSM2O43147 1006 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 PTCD1O75127 700 aaKnown RBP19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 A1BGP04217 495 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 MCM4P33991 863 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 UBE3BQ7Z3V4 1068 aa19.47■□□□□ 0.71
RAPGEF3-211ENST00000488250 ATP5J2-PTCD1G3V325 749 aa19.46■□□□□ 0.71
RAPGEF3-211ENST00000488250 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
RAPGEF3-211ENST00000488250 EAF2Q96CJ1 260 aaPredicted RBP19.46■□□□□ 0.71
RAPGEF3-211ENST00000488250 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
RAPGEF3-211ENST00000488250 PIGBQ92521 554 aa19.45■□□□□ 0.7
RAPGEF3-211ENST00000488250 CCDC191Q8NCU4 936 aa19.45■□□□□ 0.7
RAPGEF3-211ENST00000488250 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
RAPGEF3-211ENST00000488250 TJP1Q07157 1748 aa19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 MAP4K4O95819 1239 aaPredicted RBP19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 MCM2P49736 904 aa19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 PTPN12Q05209 780 aaKnown RBP19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 EVI5LQ96CN4 794 aa19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 IL25Q9H293 177 aa19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 WNK3Q9BYP7 1800 aa19.44■□□□□ 0.7
RAPGEF3-211ENST00000488250 HSPA4P34932 840 aa19.43■□□□□ 0.7
RAPGEF3-211ENST00000488250 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.43■□□□□ 0.7
RAPGEF3-211ENST00000488250 RAD50Q92878 1312 aa19.43■□□□□ 0.7
RAPGEF3-211ENST00000488250 ITGB4P16144 1822 aa19.43■□□□□ 0.7
RAPGEF3-211ENST00000488250 ATG3Q9NT62 314 aa19.43■□□□□ 0.7
RAPGEF3-211ENST00000488250 BCL9O00512 1426 aa19.42■□□□□ 0.7
RAPGEF3-211ENST00000488250 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
RAPGEF3-211ENST00000488250 FOXO4P98177 505 aa19.42■□□□□ 0.7
RAPGEF3-211ENST00000488250 RUFY2Q8WXA3 655 aa19.42■□□□□ 0.7
RAPGEF3-211ENST00000488250 SIL1Q9H173 461 aa19.42■□□□□ 0.7
RAPGEF3-211ENST00000488250 PALD1Q9ULE6 856 aa19.42■□□□□ 0.7
RAPGEF3-211ENST00000488250 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms