RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 MASTLQ96GX5 879 aa20.3■□□□□ 0.84
TRIM50-203ENST00000488217 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
TRIM50-203ENST00000488217 BRCA1P38398 1863 aaKnown RBP20.29■□□□□ 0.84
TRIM50-203ENST00000488217 NFE2L2Q16236 605 aa20.28■□□□□ 0.84
TRIM50-203ENST00000488217 SMC1BQ8NDV3 1235 aa20.28■□□□□ 0.84
TRIM50-203ENST00000488217 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRIM50-203ENST00000488217 KLRG2A4D1S0 409 aaPredicted RBP20.27■□□□□ 0.84
TRIM50-203ENST00000488217 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
TRIM50-203ENST00000488217 IFFO2Q5TF58 517 aa20.27■□□□□ 0.84
TRIM50-203ENST00000488217 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.84
TRIM50-203ENST00000488217 NRXN2Q9P2S2 1712 aa20.27■□□□□ 0.83
TRIM50-203ENST00000488217 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
TRIM50-203ENST00000488217 HLFQ16534 295 aa20.26■□□□□ 0.83
TRIM50-203ENST00000488217 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
TRIM50-203ENST00000488217 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
TRIM50-203ENST00000488217 NPR1P16066 1061 aa20.25■□□□□ 0.83
TRIM50-203ENST00000488217 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
TRIM50-203ENST00000488217 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
TRIM50-203ENST00000488217 TAOK3Q9H2K8 898 aa20.25■□□□□ 0.83
TRIM50-203ENST00000488217 FAM177BA6PVY3 158 aa20.24■□□□□ 0.83
TRIM50-203ENST00000488217 POTECB2RU33 542 aa20.24■□□□□ 0.83
TRIM50-203ENST00000488217 HTRA3P83110 453 aa20.24■□□□□ 0.83
TRIM50-203ENST00000488217 THUMPD2Q9BTF0 503 aaKnown RBP20.24■□□□□ 0.83
TRIM50-203ENST00000488217 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
TRIM50-203ENST00000488217 AFDNP55196 1824 aaKnown RBP20.24■□□□□ 0.83
TRIM50-203ENST00000488217 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
TRIM50-203ENST00000488217 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
TRIM50-203ENST00000488217 LTBP3Q9NS15 1303 aa20.23■□□□□ 0.83
TRIM50-203ENST00000488217 RALBP1Q15311 655 aa20.22■□□□□ 0.83
TRIM50-203ENST00000488217 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
TRIM50-203ENST00000488217 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
TRIM50-203ENST00000488217 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
TRIM50-203ENST00000488217 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
TRIM50-203ENST00000488217 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
TRIM50-203ENST00000488217 MYL6BP14649 208 aa20.19■□□□□ 0.82
TRIM50-203ENST00000488217 RIPK4P57078 832 aa20.19■□□□□ 0.82
TRIM50-203ENST00000488217 TTLL7Q6ZT98 887 aa20.19■□□□□ 0.82
TRIM50-203ENST00000488217 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
TRIM50-203ENST00000488217 DDNO94850 711 aaPredicted RBP20.18■□□□□ 0.82
TRIM50-203ENST00000488217 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
TRIM50-203ENST00000488217 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
TRIM50-203ENST00000488217 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
TRIM50-203ENST00000488217 MAP3K15Q6ZN16 1313 aa20.18■□□□□ 0.82
TRIM50-203ENST00000488217 SBF1O95248 1867 aa20.16■□□□□ 0.82
TRIM50-203ENST00000488217 JMYQ8N9B5 988 aa20.16■□□□□ 0.82
TRIM50-203ENST00000488217 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
TRIM50-203ENST00000488217 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
TRIM50-203ENST00000488217 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIM50-203ENST00000488217 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
TRIM50-203ENST00000488217 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
TRIM50-203ENST00000488217 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
TRIM50-203ENST00000488217 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
TRIM50-203ENST00000488217 SUSD4Q5VX71 490 aa20.14■□□□□ 0.81
TRIM50-203ENST00000488217 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
TRIM50-203ENST00000488217 ZBTB3Q9H5J0 574 aa20.14■□□□□ 0.81
TRIM50-203ENST00000488217 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
TRIM50-203ENST00000488217 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
TRIM50-203ENST00000488217 GPTP24298 496 aa20.13■□□□□ 0.81
TRIM50-203ENST00000488217 CRY2Q49AN0 593 aa20.13■□□□□ 0.81
TRIM50-203ENST00000488217 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
TRIM50-203ENST00000488217 SCN7AQ01118 1682 aa20.13■□□□□ 0.81
TRIM50-203ENST00000488217 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
TRIM50-203ENST00000488217 HOXA10P31260 410 aaPredicted RBP20.12■□□□□ 0.81
TRIM50-203ENST00000488217 CHADLQ6NUI6 762 aa20.12■□□□□ 0.81
TRIM50-203ENST00000488217 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
TRIM50-203ENST00000488217 LMOD3Q0VAK6 560 aa20.11■□□□□ 0.81
TRIM50-203ENST00000488217 PDIA6Q15084 440 aa20.11■□□□□ 0.81
TRIM50-203ENST00000488217 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
TRIM50-203ENST00000488217 GIGYF2Q6Y7W6 1299 aaKnown RBP20.11■□□□□ 0.81
TRIM50-203ENST00000488217 ANKRD31Q8N7Z5 1873 aa20.11■□□□□ 0.81
TRIM50-203ENST00000488217 DLEC1Q9Y238 1755 aa20.11■□□□□ 0.81
TRIM50-203ENST00000488217 PPP1R42Q7Z4L9 355 aa20.1■□□□□ 0.81
TRIM50-203ENST00000488217 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
TRIM50-203ENST00000488217 UBN2Q6ZU65 1347 aa20.09■□□□□ 0.81
TRIM50-203ENST00000488217 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
TRIM50-203ENST00000488217 LRP10Q7Z4F1 713 aa20.09■□□□□ 0.81
TRIM50-203ENST00000488217 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
TRIM50-203ENST00000488217 L3MBTL3Q96JM7 780 aaPredicted RBP20.09■□□□□ 0.81
TRIM50-203ENST00000488217 SLX4Q8IY92 1834 aa20.09■□□□□ 0.81
TRIM50-203ENST00000488217 FZD9O00144 591 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
TRIM50-203ENST00000488217 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 PARP10Q53GL7 1025 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 SLC10A5Q5PT55 438 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 CRAMP1Q96RY5 1269 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 PSMD1Q99460 953 aa20.08■□□□□ 0.81
TRIM50-203ENST00000488217 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
TRIM50-203ENST00000488217 CHL1O00533 1208 aa20.07■□□□□ 0.8
TRIM50-203ENST00000488217 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
TRIM50-203ENST00000488217 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
TRIM50-203ENST00000488217 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
TRIM50-203ENST00000488217 UTP14AQ9BVJ6 771 aaKnown RBP20.07■□□□□ 0.8
TRIM50-203ENST00000488217 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
TRIM50-203ENST00000488217 NTSR2O95665 410 aa20.06■□□□□ 0.8
TRIM50-203ENST00000488217 ANXA1P04083 346 aa20.06■□□□□ 0.8
TRIM50-203ENST00000488217 PROSER3Q2NL68 480 aa20.06■□□□□ 0.8
TRIM50-203ENST00000488217 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
TRIM50-203ENST00000488217 TNRC6CQ9HCJ0 1690 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms