RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 SPATA31A7Q8IWB4 1347 aa10.74□□□□□ -0.69
NECTIN3-209ENST00000488016 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
NECTIN3-209ENST00000488016 CCDC7Q96M83 1385 aa10.74□□□□□ -0.69
NECTIN3-209ENST00000488016 LRP5O75197 1615 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 S1PR4O95977 384 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 MYT1Q01538 1121 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 GRIPAP1Q4V328 841 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 MORN1Q5T089 497 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 KCNH5Q8NCM2 988 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 AATKQ6ZMQ8 1374 aa10.73□□□□□ -0.69
NECTIN3-209ENST00000488016 PEAK1Q9H792 1746 aa10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 TNNT2P45379 298 aaPredicted RBP10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 EVA1CP58658 441 aa10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 SEPT12Q8IYM1 358 aa10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 SLC6A16Q9GZN6 736 aa10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 MAP3K19Q56UN5 1328 aa10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 SPATA31A1Q5TZJ5 1347 aa10.72□□□□□ -0.69
NECTIN3-209ENST00000488016 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
NECTIN3-209ENST00000488016 SPSB2Q99619 263 aa10.71□□□□□ -0.69
NECTIN3-209ENST00000488016 THSD7AQ9UPZ6 1657 aa10.7□□□□□ -0.7
NECTIN3-209ENST00000488016 CD46P15529 392 aa10.7□□□□□ -0.7
NECTIN3-209ENST00000488016 CLCN1P35523 988 aa10.7□□□□□ -0.7
NECTIN3-209ENST00000488016 TOM1L2Q6ZVM7 507 aa10.7□□□□□ -0.7
NECTIN3-209ENST00000488016 ANKLE1Q8NAG6 615 aa10.7□□□□□ -0.7
NECTIN3-209ENST00000488016 EMILIN1Q9Y6C2 1016 aa10.7□□□□□ -0.7
NECTIN3-209ENST00000488016 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 CRB1P82279 1406 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 CGNL1Q0VF96 1302 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 YY1P25490 414 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 RGPD2P0DJD1 1756 aa10.69□□□□□ -0.7
NECTIN3-209ENST00000488016 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
NECTIN3-209ENST00000488016 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
NECTIN3-209ENST00000488016 FMNL1O95466 1100 aaPredicted RBP10.68□□□□□ -0.7
NECTIN3-209ENST00000488016 HOXC9P31274 260 aa10.68□□□□□ -0.7
NECTIN3-209ENST00000488016 SLC19A1P41440 591 aa10.68□□□□□ -0.7
NECTIN3-209ENST00000488016 SLC27A5Q9Y2P5 690 aa10.68□□□□□ -0.7
NECTIN3-209ENST00000488016 PPEF1O14829 653 aaPredicted RBP10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 GFRA3O60609 400 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 AMPHP49418 695 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 HSP90AB2PQ58FF8 381 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 CC2D1BQ5T0F9 858 aaKnown RBP10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 Q6ZNB5 142 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 BARGINQ6ZT62 677 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 TCP11L2Q8N4U5 519 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 USHBP1Q8N6Y0 703 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 IP6K1Q92551 441 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
NECTIN3-209ENST00000488016 LRRC37A3O60309 1634 aa10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 KDM4AO75164 1064 aa10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 ZMYND10O75800 440 aa10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 NLRP2Q9NX02 1062 aa10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 ABCC6O95255 1503 aa10.66□□□□□ -0.7
NECTIN3-209ENST00000488016 USP46P62068 366 aa10.65□□□□□ -0.7
NECTIN3-209ENST00000488016 SF3B2Q13435 895 aaKnown RBP10.65□□□□□ -0.7
NECTIN3-209ENST00000488016 KNSTRNQ9Y448 316 aa10.65□□□□□ -0.7
NECTIN3-209ENST00000488016 FAM208AQ9UK61 1670 aaKnown RBP10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 MAP2P11137 1827 aaKnown RBP10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 Q3C1V9 767 aa10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 MORC1Q86VD1 984 aa10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 THAP11Q96EK4 314 aa10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 POLKQ9UBT6 870 aa10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 DISP2A7MBM2 1401 aa10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
NECTIN3-209ENST00000488016 R3HDM1Q15032 1099 aaKnown RBP10.63□□□□□ -0.71
NECTIN3-209ENST00000488016 CARD10Q9BWT7 1032 aa10.63□□□□□ -0.71
NECTIN3-209ENST00000488016 FAM217BQ9NTX9 383 aaPredicted RBP10.63□□□□□ -0.71
NECTIN3-209ENST00000488016 RTL1A6NKG5 1358 aa10.63□□□□□ -0.71
NECTIN3-209ENST00000488016 FLT4P35916 1363 aa10.63□□□□□ -0.71
NECTIN3-209ENST00000488016 NRG2O14511 850 aaPredicted RBP10.62□□□□□ -0.71
NECTIN3-209ENST00000488016 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
NECTIN3-209ENST00000488016 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
NECTIN3-209ENST00000488016 PDZRN3Q9UPQ7 1066 aa10.62□□□□□ -0.71
NECTIN3-209ENST00000488016 MEGF6O75095 1541 aa10.62□□□□□ -0.71
NECTIN3-209ENST00000488016 TTLL12Q14166 644 aaPredicted RBP10.61□□□□□ -0.71
NECTIN3-209ENST00000488016 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
NECTIN3-209ENST00000488016 NSD2O96028 1365 aa10.61□□□□□ -0.71
NECTIN3-209ENST00000488016 INSRP06213 1382 aa10.61□□□□□ -0.71
NECTIN3-209ENST00000488016 DDB1Q16531 1140 aa10.6□□□□□ -0.71
NECTIN3-209ENST00000488016 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
NECTIN3-209ENST00000488016 PTF1AQ7RTS3 328 aa10.6□□□□□ -0.71
NECTIN3-209ENST00000488016 NUTM1Q86Y26 1132 aa10.6□□□□□ -0.71
NECTIN3-209ENST00000488016 MARCH10Q8NA82 808 aaPredicted RBP10.6□□□□□ -0.71
NECTIN3-209ENST00000488016 THRAP3Q9Y2W1 955 aaKnown RBP10.6□□□□□ -0.71
NECTIN3-209ENST00000488016 SMG6Q86US8 1419 aaKnown RBP10.59□□□□□ -0.71
NECTIN3-209ENST00000488016 DDX10Q13206 875 aaKnown RBP10.59□□□□□ -0.71
NECTIN3-209ENST00000488016 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
NECTIN3-209ENST00000488016 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
NECTIN3-209ENST00000488016 RNF19BQ6ZMZ0 732 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms