RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 NEFMP07197 916 aa16.2■□□□□ 0.18
OPTN-212ENST00000487935 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
OPTN-212ENST00000487935 CLEC4GQ6UXB4 293 aa16.2■□□□□ 0.18
OPTN-212ENST00000487935 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
OPTN-212ENST00000487935 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
OPTN-212ENST00000487935 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
OPTN-212ENST00000487935 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
OPTN-212ENST00000487935 SMC1BQ8NDV3 1235 aa16.19■□□□□ 0.18
OPTN-212ENST00000487935 CNKSR1Q969H4 720 aa16.19■□□□□ 0.18
OPTN-212ENST00000487935 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
OPTN-212ENST00000487935 FER1L6Q2WGJ9 1857 aa16.17■□□□□ 0.18
OPTN-212ENST00000487935 SRGNP10124 158 aa16.17■□□□□ 0.18
OPTN-212ENST00000487935 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
OPTN-212ENST00000487935 NBPF5PQ86XG9 351 aaPredicted RBP16.17■□□□□ 0.18
OPTN-212ENST00000487935 MASTLQ96GX5 879 aa16.17■□□□□ 0.18
OPTN-212ENST00000487935 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
OPTN-212ENST00000487935 DICER1Q9UPY3 1922 aaKnown RBP16.16■□□□□ 0.18
OPTN-212ENST00000487935 RGL2O15211 777 aa16.16■□□□□ 0.18
OPTN-212ENST00000487935 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
OPTN-212ENST00000487935 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
OPTN-212ENST00000487935 PNISRQ8TF01 805 aaKnown RBP16.16■□□□□ 0.18
OPTN-212ENST00000487935 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
OPTN-212ENST00000487935 SLX4Q8IY92 1834 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 NBPF26B4DH59 902 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 HTRA3P83110 453 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
OPTN-212ENST00000487935 NBPF10Q6P3W6 841 aaKnown RBP16.15■□□□□ 0.18
OPTN-212ENST00000487935 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 NBPF15Q8N660 670 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 TAOK3Q9H2K8 898 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
OPTN-212ENST00000487935 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
OPTN-212ENST00000487935 KLRG1Q96E93 195 aa16.14■□□□□ 0.17
OPTN-212ENST00000487935 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
OPTN-212ENST00000487935 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
OPTN-212ENST00000487935 NPR1P16066 1061 aa16.12■□□□□ 0.17
OPTN-212ENST00000487935 NFE2L2Q16236 605 aa16.12■□□□□ 0.17
OPTN-212ENST00000487935 PLEKHF1Q96S99 279 aa16.12■□□□□ 0.17
OPTN-212ENST00000487935 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
OPTN-212ENST00000487935 KLRG2A4D1S0 409 aaPredicted RBP16.11■□□□□ 0.17
OPTN-212ENST00000487935 FAM177BA6PVY3 158 aa16.11■□□□□ 0.17
OPTN-212ENST00000487935 POTECB2RU33 542 aa16.11■□□□□ 0.17
OPTN-212ENST00000487935 HLFQ16534 295 aa16.11■□□□□ 0.17
OPTN-212ENST00000487935 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
OPTN-212ENST00000487935 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
OPTN-212ENST00000487935 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
OPTN-212ENST00000487935 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
OPTN-212ENST00000487935 C7orf43Q8WVR3 580 aa16.1■□□□□ 0.17
OPTN-212ENST00000487935 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
OPTN-212ENST00000487935 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
OPTN-212ENST00000487935 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
OPTN-212ENST00000487935 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
OPTN-212ENST00000487935 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.16
OPTN-212ENST00000487935 ALDH1B1P30837 517 aa16.08■□□□□ 0.16
OPTN-212ENST00000487935 KIF6Q6ZMV9 814 aa16.08■□□□□ 0.16
OPTN-212ENST00000487935 THUMPD2Q9BTF0 503 aaKnown RBP16.08■□□□□ 0.16
OPTN-212ENST00000487935 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
OPTN-212ENST00000487935 FKBP4Q02790 459 aaKnown RBP eCLIP16.07■□□□□ 0.16
OPTN-212ENST00000487935 MAP3K15Q6ZN16 1313 aa16.07■□□□□ 0.16
OPTN-212ENST00000487935 NUP98P52948 1817 aa16.07■□□□□ 0.16
OPTN-212ENST00000487935 MYL6BP14649 208 aa16.06■□□□□ 0.16
OPTN-212ENST00000487935 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
OPTN-212ENST00000487935 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
OPTN-212ENST00000487935 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
OPTN-212ENST00000487935 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 IQCA1LA6NCM1 817 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 RALBP1Q15311 655 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 ZBTB3Q9H5J0 574 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
OPTN-212ENST00000487935 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
OPTN-212ENST00000487935 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
OPTN-212ENST00000487935 RIPK4P57078 832 aa16.03■□□□□ 0.16
OPTN-212ENST00000487935 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
OPTN-212ENST00000487935 L3MBTL3Q96JM7 780 aaPredicted RBP16.03■□□□□ 0.16
OPTN-212ENST00000487935 SCN4AP35499 1836 aa16.03■□□□□ 0.16
OPTN-212ENST00000487935 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
OPTN-212ENST00000487935 GPTP24298 496 aa16.02■□□□□ 0.16
OPTN-212ENST00000487935 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
OPTN-212ENST00000487935 RPGRQ92834 1020 aaKnown RBP16.02■□□□□ 0.16
OPTN-212ENST00000487935 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 POTEJP0CG39 1038 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 IARSP41252 1262 aaKnown RBP16.01■□□□□ 0.15
OPTN-212ENST00000487935 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 CC2D2BQ6DHV5 1058 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 GIGYF2Q6Y7W6 1299 aaKnown RBP16.01■□□□□ 0.15
OPTN-212ENST00000487935 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 TAF1DQ9H5J8 278 aaPredicted RBP16.01■□□□□ 0.15
OPTN-212ENST00000487935 BABAM1Q9NWV8 329 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 RIC1Q4ADV7 1423 aa16.01■□□□□ 0.15
OPTN-212ENST00000487935 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
OPTN-212ENST00000487935 ANP32CO43423 234 aa16■□□□□ 0.15
OPTN-212ENST00000487935 EIF2S2P20042 333 aaKnown RBP16■□□□□ 0.15
OPTN-212ENST00000487935 PPP1R42Q7Z4L9 355 aa16■□□□□ 0.15
OPTN-212ENST00000487935 LDHDQ86WU2 507 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms