RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
TOM1-214ENST00000487670 C7orf43Q8WVR3 580 aa22.29■■□□□ 1.16
TOM1-214ENST00000487670 ZNF496Q96IT1 587 aaPredicted RBP22.29■■□□□ 1.16
TOM1-214ENST00000487670 ZNF277Q9NRM2 450 aaPredicted RBP22.29■■□□□ 1.16
TOM1-214ENST00000487670 RNF123Q5XPI4 1314 aa22.29■■□□□ 1.16
TOM1-214ENST00000487670 RASSF10A6NK89 507 aa22.28■■□□□ 1.16
TOM1-214ENST00000487670 CAMTA2O94983 1202 aa22.28■■□□□ 1.16
TOM1-214ENST00000487670 CNBD1Q8NA66 436 aa22.28■■□□□ 1.16
TOM1-214ENST00000487670 HEG1Q9ULI3 1381 aa22.27■■□□□ 1.16
TOM1-214ENST00000487670 IQCA1LA6NCM1 817 aa22.27■■□□□ 1.16
TOM1-214ENST00000487670 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
TOM1-214ENST00000487670 STYK1Q6J9G0 422 aa22.27■■□□□ 1.16
TOM1-214ENST00000487670 CLEC11AQ9Y240 323 aa22.27■■□□□ 1.16
TOM1-214ENST00000487670 WDR33Q9C0J8 1336 aaKnown RBP22.27■■□□□ 1.16
TOM1-214ENST00000487670 A1BGP04217 495 aa22.26■■□□□ 1.15
TOM1-214ENST00000487670 CNKSR1Q969H4 720 aa22.26■■□□□ 1.15
TOM1-214ENST00000487670 EPHX2P34913 555 aa22.25■■□□□ 1.15
TOM1-214ENST00000487670 DEFB115Q30KQ5 88 aa22.25■■□□□ 1.15
TOM1-214ENST00000487670 MASTLQ96GX5 879 aa22.25■■□□□ 1.15
TOM1-214ENST00000487670 A0A087WZG4 1122 aa22.24■■□□□ 1.15
TOM1-214ENST00000487670 SLC51AQ86UW1 340 aa22.24■■□□□ 1.15
TOM1-214ENST00000487670 HACL1Q9UJ83 578 aa22.24■■□□□ 1.15
TOM1-214ENST00000487670 TSKSQ9UJT2 592 aa22.24■■□□□ 1.15
TOM1-214ENST00000487670 PDZRN3Q9UPQ7 1066 aa22.24■■□□□ 1.15
TOM1-214ENST00000487670 SNED1Q8TER0 1413 aa22.23■■□□□ 1.15
TOM1-214ENST00000487670 CCDC85CA6NKD9 419 aa22.23■■□□□ 1.15
TOM1-214ENST00000487670 STARD3NLO95772 234 aa22.23■■□□□ 1.15
TOM1-214ENST00000487670 CNTROBQ8N137 903 aa22.23■■□□□ 1.15
TOM1-214ENST00000487670 NUP98P52948 1817 aa22.22■■□□□ 1.15
TOM1-214ENST00000487670 KCNQ3O43525 872 aa22.22■■□□□ 1.15
TOM1-214ENST00000487670 CCDC93Q567U6 631 aa22.22■■□□□ 1.15
TOM1-214ENST00000487670 SETDB2Q96T68 719 aa22.22■■□□□ 1.15
TOM1-214ENST00000487670 ST5P78524 1137 aa22.21■■□□□ 1.15
TOM1-214ENST00000487670 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
TOM1-214ENST00000487670 TTC5Q8N0Z6 440 aa22.21■■□□□ 1.15
TOM1-214ENST00000487670 ABT1Q9ULW3 272 aaKnown RBP22.21■■□□□ 1.15
TOM1-214ENST00000487670 PDE4DIPQ5VU43 2346 aa22.2■■□□□ 1.15
TOM1-214ENST00000487670 NPHP1O15259 732 aa22.2■■□□□ 1.14
TOM1-214ENST00000487670 IL6STP40189 918 aaPredicted RBP22.2■■□□□ 1.14
TOM1-214ENST00000487670 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
TOM1-214ENST00000487670 IL17REQ8NFR9 667 aa22.2■■□□□ 1.14
TOM1-214ENST00000487670 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
TOM1-214ENST00000487670 MLLT1Q03111 559 aaPredicted RBP22.19■■□□□ 1.14
TOM1-214ENST00000487670 CYP4F22Q6NT55 531 aa22.19■■□□□ 1.14
TOM1-214ENST00000487670 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
TOM1-214ENST00000487670 HSPA5P11021 654 aaKnown RBP22.18■■□□□ 1.14
TOM1-214ENST00000487670 GRM1Q13255 1194 aa22.18■■□□□ 1.14
TOM1-214ENST00000487670 SOGA3Q5TF21 947 aa22.18■■□□□ 1.14
TOM1-214ENST00000487670 FZD9O00144 591 aa22.17■■□□□ 1.14
TOM1-214ENST00000487670 RGS19P49795 217 aa22.17■■□□□ 1.14
TOM1-214ENST00000487670 DZIP3Q86Y13 1208 aaKnown RBP22.17■■□□□ 1.14
TOM1-214ENST00000487670 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
TOM1-214ENST00000487670 IARSP41252 1262 aaKnown RBP22.16■■□□□ 1.14
TOM1-214ENST00000487670 MAP2K1Q02750 393 aaPredicted RBP22.16■■□□□ 1.14
TOM1-214ENST00000487670 CAPNS2Q96L46 248 aa22.16■■□□□ 1.14
TOM1-214ENST00000487670 LAMB4A4D0S4 1761 aa22.16■■□□□ 1.14
TOM1-214ENST00000487670 FAM177BA6PVY3 158 aa22.15■■□□□ 1.14
TOM1-214ENST00000487670 TRAF5O00463 557 aa22.15■■□□□ 1.14
TOM1-214ENST00000487670 AOC2O75106 756 aa22.15■■□□□ 1.14
TOM1-214ENST00000487670 AMER1Q5JTC6 1135 aaPredicted RBP22.15■■□□□ 1.14
TOM1-214ENST00000487670 SYNE4Q8N205 404 aa22.15■■□□□ 1.14
TOM1-214ENST00000487670 NPR1P16066 1061 aa22.14■■□□□ 1.13
TOM1-214ENST00000487670 PAXIP1Q6ZW49 1069 aaPredicted RBP22.14■■□□□ 1.13
TOM1-214ENST00000487670 NBPF5PQ86XG9 351 aaPredicted RBP22.14■■□□□ 1.13
TOM1-214ENST00000487670 USP16Q9Y5T5 823 aa22.14■■□□□ 1.13
TOM1-214ENST00000487670 KLRG2A4D1S0 409 aaPredicted RBP22.13■■□□□ 1.13
TOM1-214ENST00000487670 CST9Q5W186 159 aa22.13■■□□□ 1.13
TOM1-214ENST00000487670 ABCC12Q96J65 1359 aa22.12■■□□□ 1.13
TOM1-214ENST00000487670 EPS15P42566 896 aa22.12■■□□□ 1.13
TOM1-214ENST00000487670 PNMA8AQ86V59 439 aaPredicted RBP22.12■■□□□ 1.13
TOM1-214ENST00000487670 GJA3Q9Y6H8 435 aa22.12■■□□□ 1.13
TOM1-214ENST00000487670 POLR2AP24928 1970 aaKnown RBP22.12■■□□□ 1.13
TOM1-214ENST00000487670 SCNN1DP51172 638 aa22.11■■□□□ 1.13
TOM1-214ENST00000487670 TEFQ10587 303 aa22.11■■□□□ 1.13
TOM1-214ENST00000487670 GPC2Q8N158 579 aa22.11■■□□□ 1.13
TOM1-214ENST00000487670 FMNL2Q96PY5 1086 aa22.11■■□□□ 1.13
TOM1-214ENST00000487670 LAMB2P55268 1798 aa22.1■■□□□ 1.13
TOM1-214ENST00000487670 GPR101Q96P66 508 aaPredicted RBP22.1■■□□□ 1.13
TOM1-214ENST00000487670 KNSTRNQ9Y448 316 aa22.1■■□□□ 1.13
TOM1-214ENST00000487670 CEMIPQ8WUJ3 1361 aa22.1■■□□□ 1.13
TOM1-214ENST00000487670 TAF1P21675 1872 aa22.09■■□□□ 1.13
TOM1-214ENST00000487670 TEX13AQ9BXU3 409 aaPredicted RBP22.09■■□□□ 1.13
TOM1-214ENST00000487670 MCOLN1Q9GZU1 580 aa22.09■■□□□ 1.13
TOM1-214ENST00000487670 DIAPH1O60610 1272 aaKnown RBP22.08■■□□□ 1.13
TOM1-214ENST00000487670 CFAP44Q96MT7 982 aa22.08■■□□□ 1.13
TOM1-214ENST00000487670 DLG5Q8TDM6 1919 aa22.08■■□□□ 1.12
TOM1-214ENST00000487670 GNAT3A8MTJ3 354 aa22.07■■□□□ 1.12
TOM1-214ENST00000487670 NBPF26B4DH59 902 aa22.07■■□□□ 1.12
TOM1-214ENST00000487670 HLFQ16534 295 aa22.07■■□□□ 1.12
TOM1-214ENST00000487670 NBPF10Q6P3W6 841 aaKnown RBP22.07■■□□□ 1.12
TOM1-214ENST00000487670 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
TOM1-214ENST00000487670 NBPF15Q8N660 670 aa22.07■■□□□ 1.12
TOM1-214ENST00000487670 NIP7Q9Y221 180 aaKnown RBP eCLIP22.07■■□□□ 1.12
TOM1-214ENST00000487670 TLL2Q9Y6L7 1015 aa22.06■■□□□ 1.12
TOM1-214ENST00000487670 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
TOM1-214ENST00000487670 PCDH10Q9P2E7 1040 aa22.05■■□□□ 1.12
TOM1-214ENST00000487670 KDM3BQ7LBC6 1761 aa22.03■■□□□ 1.12
TOM1-214ENST00000487670 BTBD11A6QL63 1104 aa22.03■■□□□ 1.12
TOM1-214ENST00000487670 ECE1P42892 770 aa22.03■■□□□ 1.12
TOM1-214ENST00000487670 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms