RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
COL4A6-207ENST00000487645 GYS1P13807 737 aa17.04■□□□□ 0.32
COL4A6-207ENST00000487645 RARSP54136 660 aaKnown RBP17.04■□□□□ 0.32
COL4A6-207ENST00000487645 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
COL4A6-207ENST00000487645 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
COL4A6-207ENST00000487645 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
COL4A6-207ENST00000487645 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
COL4A6-207ENST00000487645 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
COL4A6-207ENST00000487645 SRP68Q9UHB9 627 aaKnown RBP17.04■□□□□ 0.32
COL4A6-207ENST00000487645 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
COL4A6-207ENST00000487645 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
COL4A6-207ENST00000487645 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
COL4A6-207ENST00000487645 ZNF652Q9Y2D9 606 aa17.03■□□□□ 0.32
COL4A6-207ENST00000487645 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
COL4A6-207ENST00000487645 FLIIQ13045 1269 aa17.02■□□□□ 0.32
COL4A6-207ENST00000487645 GIGYF2Q6Y7W6 1299 aaKnown RBP17.02■□□□□ 0.32
COL4A6-207ENST00000487645 G2E3Q7L622 706 aa17.02■□□□□ 0.32
COL4A6-207ENST00000487645 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
COL4A6-207ENST00000487645 FKBP8Q14318 412 aa17.01■□□□□ 0.31
COL4A6-207ENST00000487645 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
COL4A6-207ENST00000487645 ZBTB7AO95365 584 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 TM4SF1P30408 202 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 HLFQ16534 295 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 KSR2Q6VAB6 950 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
COL4A6-207ENST00000487645 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
COL4A6-207ENST00000487645 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
COL4A6-207ENST00000487645 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
COL4A6-207ENST00000487645 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
COL4A6-207ENST00000487645 PTPRCP08575 1304 aa16.98■□□□□ 0.31
COL4A6-207ENST00000487645 PI4KAP2A4QPH2 592 aa16.98■□□□□ 0.31
COL4A6-207ENST00000487645 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
COL4A6-207ENST00000487645 TCIRG1Q13488 830 aa16.98■□□□□ 0.31
COL4A6-207ENST00000487645 PI4KAP1Q8N8J0 262 aa16.98■□□□□ 0.31
COL4A6-207ENST00000487645 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
COL4A6-207ENST00000487645 NFIXQ14938 502 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 TBC1D9BQ66K14 1250 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 MSL1Q68DK7 614 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
COL4A6-207ENST00000487645 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
COL4A6-207ENST00000487645 BCAR3O75815 825 aa16.96■□□□□ 0.31
COL4A6-207ENST00000487645 MMP10P09238 476 aa16.96■□□□□ 0.31
COL4A6-207ENST00000487645 POLD1P28340 1107 aa16.96■□□□□ 0.31
COL4A6-207ENST00000487645 TRIM28Q13263 835 aaKnown RBP16.96■□□□□ 0.31
COL4A6-207ENST00000487645 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
COL4A6-207ENST00000487645 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
COL4A6-207ENST00000487645 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
COL4A6-207ENST00000487645 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
COL4A6-207ENST00000487645 ADCY9O60503 1353 aa16.96■□□□□ 0.31
COL4A6-207ENST00000487645 AFDNP55196 1824 aaKnown RBP16.96■□□□□ 0.3
COL4A6-207ENST00000487645 ATP10DQ9P241 1426 aa16.96■□□□□ 0.3
COL4A6-207ENST00000487645 KIF16BQ96L93 1317 aa16.96■□□□□ 0.3
COL4A6-207ENST00000487645 PTGER2P43116 358 aa16.95■□□□□ 0.3
COL4A6-207ENST00000487645 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
COL4A6-207ENST00000487645 PARP3Q9Y6F1 533 aa16.95■□□□□ 0.3
COL4A6-207ENST00000487645 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
COL4A6-207ENST00000487645 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
COL4A6-207ENST00000487645 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
COL4A6-207ENST00000487645 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
COL4A6-207ENST00000487645 CARMIL3Q8ND23 1372 aa16.93■□□□□ 0.3
COL4A6-207ENST00000487645 POLRMTO00411 1230 aaKnown RBP16.93■□□□□ 0.3
COL4A6-207ENST00000487645 BICDL1Q6ZP65 573 aa16.93■□□□□ 0.3
COL4A6-207ENST00000487645 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
COL4A6-207ENST00000487645 NRXN2Q9P2S2 1712 aa16.93■□□□□ 0.3
COL4A6-207ENST00000487645 SERPINB2P05120 415 aa16.92■□□□□ 0.3
COL4A6-207ENST00000487645 DDR1Q08345 913 aa16.92■□□□□ 0.3
COL4A6-207ENST00000487645 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
COL4A6-207ENST00000487645 MYD88Q99836 296 aa16.92■□□□□ 0.3
COL4A6-207ENST00000487645 F6X3S4 739 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 GPTP24298 496 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 TPTE2Q6XPS3 522 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 NLRP10Q86W26 655 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 CCDC191Q8NCU4 936 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 NYXQ9GZU5 481 aa16.91■□□□□ 0.3
COL4A6-207ENST00000487645 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
COL4A6-207ENST00000487645 SUSD4Q5VX71 490 aa16.9■□□□□ 0.3
COL4A6-207ENST00000487645 ZKSCAN2Q63HK3 967 aa16.9■□□□□ 0.3
COL4A6-207ENST00000487645 ATF7IPQ6VMQ6 1270 aa16.9■□□□□ 0.3
COL4A6-207ENST00000487645 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
COL4A6-207ENST00000487645 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
COL4A6-207ENST00000487645 UBN2Q6ZU65 1347 aa16.9■□□□□ 0.3
COL4A6-207ENST00000487645 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.3
COL4A6-207ENST00000487645 LRP5O75197 1615 aa16.89■□□□□ 0.29
COL4A6-207ENST00000487645 IGKV5-2P06315 115 aa16.89■□□□□ 0.29
COL4A6-207ENST00000487645 BEND3Q5T5X7 828 aa16.89■□□□□ 0.29
COL4A6-207ENST00000487645 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
COL4A6-207ENST00000487645 RNF123Q5XPI4 1314 aa16.89■□□□□ 0.29
COL4A6-207ENST00000487645 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.29
COL4A6-207ENST00000487645 N4BP2Q86UW6 1770 aaPredicted RBP16.88■□□□□ 0.29
COL4A6-207ENST00000487645 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
COL4A6-207ENST00000487645 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
COL4A6-207ENST00000487645 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
COL4A6-207ENST00000487645 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
COL4A6-207ENST00000487645 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms