RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
SGIP1-212ENST00000487507 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
SGIP1-212ENST00000487507 CANXP27824 592 aaKnown RBP17.19■□□□□ 0.34
SGIP1-212ENST00000487507 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
SGIP1-212ENST00000487507 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
SGIP1-212ENST00000487507 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
SGIP1-212ENST00000487507 CNKSR1Q969H4 720 aa17.18■□□□□ 0.34
SGIP1-212ENST00000487507 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
SGIP1-212ENST00000487507 CST9Q5W186 159 aa17.17■□□□□ 0.34
SGIP1-212ENST00000487507 ZNF330Q9Y3S2 320 aaPredicted RBP17.17■□□□□ 0.34
SGIP1-212ENST00000487507 MAP2K2P36507 400 aa17.16■□□□□ 0.34
SGIP1-212ENST00000487507 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
SGIP1-212ENST00000487507 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
SGIP1-212ENST00000487507 OLFM4Q6UX06 510 aa17.16■□□□□ 0.34
SGIP1-212ENST00000487507 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
SGIP1-212ENST00000487507 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 PDZRN3Q9UPQ7 1066 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 TLL2Q9Y6L7 1015 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
SGIP1-212ENST00000487507 CA12O43570 354 aa17.14■□□□□ 0.33
SGIP1-212ENST00000487507 CCDC93Q567U6 631 aa17.14■□□□□ 0.33
SGIP1-212ENST00000487507 BCORQ6W2J9 1755 aa17.14■□□□□ 0.33
SGIP1-212ENST00000487507 SRGNP10124 158 aa17.13■□□□□ 0.33
SGIP1-212ENST00000487507 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
SGIP1-212ENST00000487507 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
SGIP1-212ENST00000487507 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
SGIP1-212ENST00000487507 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
SGIP1-212ENST00000487507 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
SGIP1-212ENST00000487507 AEBP1Q8IUX7 1158 aa17.12■□□□□ 0.33
SGIP1-212ENST00000487507 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
SGIP1-212ENST00000487507 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
SGIP1-212ENST00000487507 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
SGIP1-212ENST00000487507 ST5P78524 1137 aa17.11■□□□□ 0.33
SGIP1-212ENST00000487507 GPC2Q8N158 579 aa17.11■□□□□ 0.33
SGIP1-212ENST00000487507 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
SGIP1-212ENST00000487507 EPS15P42566 896 aa17.1■□□□□ 0.33
SGIP1-212ENST00000487507 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
SGIP1-212ENST00000487507 FZD9O00144 591 aa17.09■□□□□ 0.33
SGIP1-212ENST00000487507 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
SGIP1-212ENST00000487507 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
SGIP1-212ENST00000487507 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
SGIP1-212ENST00000487507 COL4A5P29400 1685 aa17.08■□□□□ 0.32
SGIP1-212ENST00000487507 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
SGIP1-212ENST00000487507 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
SGIP1-212ENST00000487507 SETDB2Q96T68 719 aa17.08■□□□□ 0.32
SGIP1-212ENST00000487507 SLC52A2Q9HAB3 445 aa17.08■□□□□ 0.32
SGIP1-212ENST00000487507 LGR6Q9HBX8 967 aa17.08■□□□□ 0.32
SGIP1-212ENST00000487507 A0A087WZG4 1122 aa17.07■□□□□ 0.32
SGIP1-212ENST00000487507 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
SGIP1-212ENST00000487507 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
SGIP1-212ENST00000487507 JDP2Q8WYK2 163 aa17.06■□□□□ 0.32
SGIP1-212ENST00000487507 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
SGIP1-212ENST00000487507 SCNN1DP51172 638 aa17.05■□□□□ 0.32
SGIP1-212ENST00000487507 RTKN2Q8IZC4 609 aa17.04■□□□□ 0.32
SGIP1-212ENST00000487507 GLIS2Q9BZE0 524 aaPredicted RBP17.04■□□□□ 0.32
SGIP1-212ENST00000487507 POLR2AP24928 1970 aaKnown RBP17.04■□□□□ 0.32
SGIP1-212ENST00000487507 NPR1P16066 1061 aa17.03■□□□□ 0.32
SGIP1-212ENST00000487507 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
SGIP1-212ENST00000487507 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
SGIP1-212ENST00000487507 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
SGIP1-212ENST00000487507 MRC1P22897 1456 aa17.03■□□□□ 0.32
SGIP1-212ENST00000487507 STARD3NLO95772 234 aa17.02■□□□□ 0.32
SGIP1-212ENST00000487507 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
SGIP1-212ENST00000487507 GCC1Q96CN9 775 aa17.02■□□□□ 0.32
SGIP1-212ENST00000487507 NBPF5PQ86XG9 351 aaPredicted RBP17.01■□□□□ 0.31
SGIP1-212ENST00000487507 FAM177BA6PVY3 158 aa17■□□□□ 0.31
SGIP1-212ENST00000487507 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
SGIP1-212ENST00000487507 NOGQ13253 232 aa17■□□□□ 0.31
SGIP1-212ENST00000487507 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
SGIP1-212ENST00000487507 TRPA1O75762 1119 aa16.99■□□□□ 0.31
SGIP1-212ENST00000487507 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
SGIP1-212ENST00000487507 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
SGIP1-212ENST00000487507 CAMTA2O94983 1202 aa16.98■□□□□ 0.31
SGIP1-212ENST00000487507 TTC5Q8N0Z6 440 aa16.98■□□□□ 0.31
SGIP1-212ENST00000487507 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
SGIP1-212ENST00000487507 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
SGIP1-212ENST00000487507 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
SGIP1-212ENST00000487507 HUNKP57058 714 aa16.97■□□□□ 0.31
SGIP1-212ENST00000487507 A1BGP04217 495 aa16.96■□□□□ 0.31
SGIP1-212ENST00000487507 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
SGIP1-212ENST00000487507 CDCA8Q53HL2 280 aa16.96■□□□□ 0.31
SGIP1-212ENST00000487507 DLK2Q6UY11 383 aa16.96■□□□□ 0.31
SGIP1-212ENST00000487507 CTU1Q7Z7A3 348 aaKnown RBP16.96■□□□□ 0.31
SGIP1-212ENST00000487507 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
SGIP1-212ENST00000487507 DZIP3Q86Y13 1208 aaKnown RBP16.96■□□□□ 0.31
SGIP1-212ENST00000487507 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
SGIP1-212ENST00000487507 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
SGIP1-212ENST00000487507 PSMD1Q99460 953 aa16.95■□□□□ 0.3
SGIP1-212ENST00000487507 RNF186Q9NXI6 227 aa16.95■□□□□ 0.3
SGIP1-212ENST00000487507 SIPA1L3O60292 1781 aaPredicted RBP16.94■□□□□ 0.3
SGIP1-212ENST00000487507 IL6STP40189 918 aaPredicted RBP16.94■□□□□ 0.3
SGIP1-212ENST00000487507 KIF23Q02241 960 aaPredicted RBP16.94■□□□□ 0.3
SGIP1-212ENST00000487507 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
SGIP1-212ENST00000487507 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
SGIP1-212ENST00000487507 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
SGIP1-212ENST00000487507 ALDH1B1P30837 517 aa16.93■□□□□ 0.3
SGIP1-212ENST00000487507 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms