RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
HOXA9-204ENST00000487384 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
HOXA9-204ENST00000487384 PIP4K2AP48426 406 aaPredicted RBP11.35□□□□□ -0.59
HOXA9-204ENST00000487384 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
HOXA9-204ENST00000487384 EAPPQ56P03 285 aaPredicted RBP11.35□□□□□ -0.59
HOXA9-204ENST00000487384 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
HOXA9-204ENST00000487384 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
HOXA9-204ENST00000487384 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
HOXA9-204ENST00000487384 CNTNAP1P78357 1384 aa11.35□□□□□ -0.59
HOXA9-204ENST00000487384 CAMTA2O94983 1202 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 SRGNP10124 158 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 IL6STP40189 918 aaPredicted RBP11.34□□□□□ -0.59
HOXA9-204ENST00000487384 VEGFBP49765 207 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 ST5P78524 1137 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
HOXA9-204ENST00000487384 STYK1Q6J9G0 422 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 MASTLQ96GX5 879 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 PASKQ96RG2 1323 aa11.34□□□□□ -0.59
HOXA9-204ENST00000487384 IQCA1LA6NCM1 817 aa11.33□□□□□ -0.6
HOXA9-204ENST00000487384 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
HOXA9-204ENST00000487384 KCNQ3O43525 872 aa11.33□□□□□ -0.6
HOXA9-204ENST00000487384 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
HOXA9-204ENST00000487384 OLFM4Q6UX06 510 aa11.33□□□□□ -0.6
HOXA9-204ENST00000487384 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
HOXA9-204ENST00000487384 AIDAQ96BJ3 306 aa11.33□□□□□ -0.6
HOXA9-204ENST00000487384 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
HOXA9-204ENST00000487384 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
HOXA9-204ENST00000487384 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
HOXA9-204ENST00000487384 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
HOXA9-204ENST00000487384 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
HOXA9-204ENST00000487384 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
HOXA9-204ENST00000487384 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
HOXA9-204ENST00000487384 NBPF5PQ86XG9 351 aaPredicted RBP11.32□□□□□ -0.6
HOXA9-204ENST00000487384 DZIP3Q86Y13 1208 aaKnown RBP11.32□□□□□ -0.6
HOXA9-204ENST00000487384 FMNL2Q96PY5 1086 aa11.32□□□□□ -0.6
HOXA9-204ENST00000487384 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
HOXA9-204ENST00000487384 ZNF541Q9H0D2 1346 aa11.32□□□□□ -0.6
HOXA9-204ENST00000487384 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
HOXA9-204ENST00000487384 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
HOXA9-204ENST00000487384 LBX1P52954 281 aa11.31□□□□□ -0.6
HOXA9-204ENST00000487384 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
HOXA9-204ENST00000487384 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
HOXA9-204ENST00000487384 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
HOXA9-204ENST00000487384 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 MAP1SQ66K74 1059 aaPredicted RBP11.3□□□□□ -0.6
HOXA9-204ENST00000487384 GAS2L2Q8NHY3 880 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 ADAMTSL1Q8N6G6 1762 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
HOXA9-204ENST00000487384 BTBD11A6QL63 1104 aa11.29□□□□□ -0.6
HOXA9-204ENST00000487384 NPR1P16066 1061 aa11.29□□□□□ -0.6
HOXA9-204ENST00000487384 EPHX2P34913 555 aa11.29□□□□□ -0.6
HOXA9-204ENST00000487384 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
HOXA9-204ENST00000487384 WBP1LQ9NX94 342 aa11.29□□□□□ -0.6
HOXA9-204ENST00000487384 COL3A1P02461 1466 aaPredicted RBP11.29□□□□□ -0.6
HOXA9-204ENST00000487384 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
HOXA9-204ENST00000487384 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
HOXA9-204ENST00000487384 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
HOXA9-204ENST00000487384 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
HOXA9-204ENST00000487384 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
HOXA9-204ENST00000487384 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
HOXA9-204ENST00000487384 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.6
HOXA9-204ENST00000487384 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
HOXA9-204ENST00000487384 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
HOXA9-204ENST00000487384 SYNE4Q8N205 404 aa11.27□□□□□ -0.61
HOXA9-204ENST00000487384 ABT1Q9ULW3 272 aaKnown RBP11.27□□□□□ -0.61
HOXA9-204ENST00000487384 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
HOXA9-204ENST00000487384 NUP98P52948 1817 aa11.27□□□□□ -0.61
HOXA9-204ENST00000487384 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
HOXA9-204ENST00000487384 RASSF10A6NK89 507 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
HOXA9-204ENST00000487384 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
HOXA9-204ENST00000487384 GRM1Q13255 1194 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 CLEC4GQ6UXB4 293 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 TPTE2Q6XPS3 522 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 ABHD8Q96I13 439 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
HOXA9-204ENST00000487384 LTBP1Q14766 1721 aa11.26□□□□□ -0.61
HOXA9-204ENST00000487384 CASP8AP2Q9UKL3 1982 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 KLRG2A4D1S0 409 aaPredicted RBP11.25□□□□□ -0.61
HOXA9-204ENST00000487384 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 FZD9O00144 591 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 ATXN8OSP0DMR3 200 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
HOXA9-204ENST00000487384 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 HLFQ16534 295 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
HOXA9-204ENST00000487384 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
HOXA9-204ENST00000487384 MCM10Q7L590 875 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
HOXA9-204ENST00000487384 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
HOXA9-204ENST00000487384 COL4A5P29400 1685 aa11.24□□□□□ -0.61
HOXA9-204ENST00000487384 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
HOXA9-204ENST00000487384 ALDH1B1P30837 517 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms