RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ACBD3Q9H3P7 528 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 CDC42BPAQ5VT25 1732 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 LAMC1P11047 1609 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 RTL1A6NKG5 1358 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 FAM173BQ6P4H8 233 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 CBX8Q9HC52 389 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 ZRANB1Q9UGI0 708 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 SNX14Q9Y5W7 946 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 CCDC69A6NI79 296 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 HSPA4P34932 840 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 LRMPQ12912 555 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 TAF7Q15545 349 aaPredicted RBP8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 G2E3Q7L622 706 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 TMC6Q7Z403 805 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 BOLA2Q9H3K6 86 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 RIMS2Q9UQ26 1411 aa8.98□□□□□ -0.97
COL6A4P1-202ENST00000487147 TRIM29Q14134 588 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 VPS53Q5VIR6 699 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 RAPGEF3O95398 923 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 ZNF75DP51815 510 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 ATP2B3Q16720 1220 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 CFAP100Q494V2 611 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 NUTM2GQ5VZR2 741 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 CCAR1Q8IX12 1150 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 FSIP1Q8NA03 581 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 EVI5LQ96CN4 794 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 WASLO00401 505 aaPredicted RBP8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 CBFA2T2O43439 604 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 IL13P35225 146 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 ERO1AQ96HE7 468 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 NEUROD6Q96NK8 337 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 RBM8AQ9Y5S9 174 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 TRPM2O94759 1503 aa8.97□□□□□ -0.97
COL6A4P1-202ENST00000487147 SGSM2O43147 1006 aa8.96□□□□□ -0.97
COL6A4P1-202ENST00000487147 RAD50Q92878 1312 aa8.96□□□□□ -0.97
COL6A4P1-202ENST00000487147 SOS1Q07889 1333 aaPredicted RBP8.96□□□□□ -0.97
COL6A4P1-202ENST00000487147 RGS12O14924 1447 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 GUCY1B3Q02153 619 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 RALYLQ86SE5 291 aaKnown RBP8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 CD109Q6YHK3 1445 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 CHL1O00533 1208 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 PES1O00541 588 aaKnown RBP8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 ELF2Q15723 593 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 LRRFIP1Q32MZ4 808 aaKnown RBP8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 OSBPL3Q9H4L5 887 aa8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.96□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZSCAN12O43309 604 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 TRDNQ13061 729 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 EIF4A2Q14240 407 aaKnown RBP8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 HSP90AB2PQ58FF8 381 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 CCDC150Q8NCX0 1101 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 DNAAF4Q8WXU2 420 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 GTF3C6Q969F1 213 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZSCAN16Q9H4T2 348 aaPredicted RBP8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 ABCA8O94911 1581 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 DHX16O60231 1041 aaKnown RBP8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 EIF3JO75822 258 aaKnown RBP8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 TSR1Q2NL82 804 aaKnown RBP8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 ARHGAP29Q52LW3 1261 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 TTLL5Q6EMB2 1281 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 DNAI1Q9UI46 699 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 IQGAP3Q86VI3 1631 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 BIN1O00499 593 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 ERLIN1O75477 346 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 RUFY3Q7L099 469 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 AOPEPQ8N6M6 819 aa8.95□□□□□ -0.98
COL6A4P1-202ENST00000487147 PTCH1Q13635 1447 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 EPB41L2O43491 1005 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZSCAN20P17040 1043 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 SETQ01105 290 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 CNPY4Q8N129 248 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 SSH2Q76I76 1423 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 LIG1P18858 919 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 SKIDA1Q1XH10 827 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 SYT10Q6XYQ8 523 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 JMYQ8N9B5 988 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 BRF1Q92994 677 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 PRDM4Q9UKN5 801 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZNF215Q9UL58 517 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 MTMR6Q9Y217 621 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 TXLNBQ8N3L3 684 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 CLSTN2Q9H4D0 955 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 USP16Q9Y5T5 823 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 MYOM2P54296 1465 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 TOP1P11387 765 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 WASHC4Q2M389 1173 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 CREB3L3Q68CJ9 461 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 SECISBP2LQ93073 1101 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 SPTLC3Q9NUV7 552 aa8.94□□□□□ -0.98
COL6A4P1-202ENST00000487147 PIK3R4Q99570 1358 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms