RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
PFDN4-204ENST00000487129 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
PFDN4-204ENST00000487129 IQCA1LA6NCM1 817 aa20.25■□□□□ 0.83
PFDN4-204ENST00000487129 A1BGP04217 495 aa20.25■□□□□ 0.83
PFDN4-204ENST00000487129 MASTLQ96GX5 879 aa20.25■□□□□ 0.83
PFDN4-204ENST00000487129 WBP1LQ9NX94 342 aa20.25■□□□□ 0.83
PFDN4-204ENST00000487129 ZNF541Q9H0D2 1346 aa20.25■□□□□ 0.83
PFDN4-204ENST00000487129 SETDB2Q96T68 719 aa20.24■□□□□ 0.83
PFDN4-204ENST00000487129 TEX13AQ9BXU3 409 aaPredicted RBP20.24■□□□□ 0.83
PFDN4-204ENST00000487129 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
PFDN4-204ENST00000487129 TMEM88BA6NKF7 163 aa20.23■□□□□ 0.83
PFDN4-204ENST00000487129 CTCFP49711 727 aaPredicted RBP20.23■□□□□ 0.83
PFDN4-204ENST00000487129 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
PFDN4-204ENST00000487129 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
PFDN4-204ENST00000487129 CEMIPQ8WUJ3 1361 aa20.22■□□□□ 0.83
PFDN4-204ENST00000487129 KLRG2A4D1S0 409 aaPredicted RBP20.22■□□□□ 0.83
PFDN4-204ENST00000487129 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
PFDN4-204ENST00000487129 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
PFDN4-204ENST00000487129 SNED1Q8TER0 1413 aa20.21■□□□□ 0.83
PFDN4-204ENST00000487129 KCNQ3O43525 872 aa20.21■□□□□ 0.83
PFDN4-204ENST00000487129 ST5P78524 1137 aa20.21■□□□□ 0.83
PFDN4-204ENST00000487129 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
PFDN4-204ENST00000487129 RASSF10A6NK89 507 aa20.2■□□□□ 0.82
PFDN4-204ENST00000487129 PER1O15534 1290 aaPredicted RBP20.2■□□□□ 0.82
PFDN4-204ENST00000487129 SLC34A2O95436 690 aa20.2■□□□□ 0.82
PFDN4-204ENST00000487129 LBX1P52954 281 aa20.2■□□□□ 0.82
PFDN4-204ENST00000487129 TEFQ10587 303 aa20.2■□□□□ 0.82
PFDN4-204ENST00000487129 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
PFDN4-204ENST00000487129 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.82
PFDN4-204ENST00000487129 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
PFDN4-204ENST00000487129 FKBP4Q02790 459 aaKnown RBP eCLIP20.19■□□□□ 0.82
PFDN4-204ENST00000487129 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
PFDN4-204ENST00000487129 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
PFDN4-204ENST00000487129 HSPA8P11142 646 aaKnown RBP20.18■□□□□ 0.82
PFDN4-204ENST00000487129 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
PFDN4-204ENST00000487129 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
PFDN4-204ENST00000487129 USP16Q9Y5T5 823 aa20.18■□□□□ 0.82
PFDN4-204ENST00000487129 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
PFDN4-204ENST00000487129 FZD9O00144 591 aa20.17■□□□□ 0.82
PFDN4-204ENST00000487129 NPR1P16066 1061 aa20.17■□□□□ 0.82
PFDN4-204ENST00000487129 EPHX2P34913 555 aa20.17■□□□□ 0.82
PFDN4-204ENST00000487129 EAPPQ56P03 285 aaPredicted RBP20.17■□□□□ 0.82
PFDN4-204ENST00000487129 HACL1Q9UJ83 578 aa20.17■□□□□ 0.82
PFDN4-204ENST00000487129 THSD7BQ9C0I4 1608 aa20.16■□□□□ 0.82
PFDN4-204ENST00000487129 COL4A5P29400 1685 aa20.16■□□□□ 0.82
PFDN4-204ENST00000487129 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
PFDN4-204ENST00000487129 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
PFDN4-204ENST00000487129 NBPF5PQ86XG9 351 aaPredicted RBP20.16■□□□□ 0.82
PFDN4-204ENST00000487129 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
PFDN4-204ENST00000487129 KIF7Q2M1P5 1343 aa20.16■□□□□ 0.82
PFDN4-204ENST00000487129 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
PFDN4-204ENST00000487129 NPHP1O15259 732 aa20.15■□□□□ 0.82
PFDN4-204ENST00000487129 ABHD8Q96I13 439 aa20.15■□□□□ 0.82
PFDN4-204ENST00000487129 LTBP1Q14766 1721 aa20.14■□□□□ 0.81
PFDN4-204ENST00000487129 CNTROBQ8N137 903 aa20.14■□□□□ 0.81
PFDN4-204ENST00000487129 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
PFDN4-204ENST00000487129 DEFB115Q30KQ5 88 aa20.13■□□□□ 0.81
PFDN4-204ENST00000487129 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
PFDN4-204ENST00000487129 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
PFDN4-204ENST00000487129 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
PFDN4-204ENST00000487129 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
PFDN4-204ENST00000487129 PNMA8AQ86V59 439 aaPredicted RBP20.12■□□□□ 0.81
PFDN4-204ENST00000487129 RTKN2Q8IZC4 609 aa20.12■□□□□ 0.81
PFDN4-204ENST00000487129 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
PFDN4-204ENST00000487129 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
PFDN4-204ENST00000487129 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
PFDN4-204ENST00000487129 RGL2O15211 777 aa20.11■□□□□ 0.81
PFDN4-204ENST00000487129 FAM161AQ3B820 660 aa20.11■□□□□ 0.81
PFDN4-204ENST00000487129 GPC2Q8N158 579 aa20.11■□□□□ 0.81
PFDN4-204ENST00000487129 CLEC11AQ9Y240 323 aa20.11■□□□□ 0.81
PFDN4-204ENST00000487129 U2SURPO15042 1029 aaKnown RBP20.1■□□□□ 0.81
PFDN4-204ENST00000487129 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
PFDN4-204ENST00000487129 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
PFDN4-204ENST00000487129 SYNE4Q8N205 404 aa20.1■□□□□ 0.81
PFDN4-204ENST00000487129 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
PFDN4-204ENST00000487129 NIP7Q9Y221 180 aaKnown RBP eCLIP20.09■□□□□ 0.81
PFDN4-204ENST00000487129 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
PFDN4-204ENST00000487129 ABCC12Q96J65 1359 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 MAP2K1Q02750 393 aaPredicted RBP20.08■□□□□ 0.81
PFDN4-204ENST00000487129 CRY2Q49AN0 593 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 TPTE2Q6XPS3 522 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 SLC51AQ86UW1 340 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 PSMD1Q99460 953 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
PFDN4-204ENST00000487129 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
PFDN4-204ENST00000487129 HLFQ16534 295 aa20.07■□□□□ 0.8
PFDN4-204ENST00000487129 ABT1Q9ULW3 272 aaKnown RBP20.07■□□□□ 0.8
PFDN4-204ENST00000487129 SCNN1DP51172 638 aa20.06■□□□□ 0.8
PFDN4-204ENST00000487129 FAM177BA6PVY3 158 aa20.05■□□□□ 0.8
PFDN4-204ENST00000487129 ALDH1B1P30837 517 aa20.05■□□□□ 0.8
PFDN4-204ENST00000487129 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
PFDN4-204ENST00000487129 CST9Q5W186 159 aa20.05■□□□□ 0.8
PFDN4-204ENST00000487129 EPS15P42566 896 aa20.04■□□□□ 0.8
PFDN4-204ENST00000487129 RGS19P49795 217 aa20.04■□□□□ 0.8
PFDN4-204ENST00000487129 CAPNS2Q96L46 248 aa20.04■□□□□ 0.8
PFDN4-204ENST00000487129 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
PFDN4-204ENST00000487129 MCM10Q7L590 875 aa20.03■□□□□ 0.8
PFDN4-204ENST00000487129 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.8
PFDN4-204ENST00000487129 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms