RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 DDX12PQ92771 950 aa14.24□□□□□ -0.13
ABCA2-218ENST00000487109 TEX13AQ9BXU3 409 aaPredicted RBP14.24□□□□□ -0.13
ABCA2-218ENST00000487109 TTC21AQ8NDW8 1320 aa14.24□□□□□ -0.13
ABCA2-218ENST00000487109 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
ABCA2-218ENST00000487109 ZNF444Q8N0Y2 327 aaPredicted RBP14.24□□□□□ -0.13
ABCA2-218ENST00000487109 A0A087WZG4 1122 aa14.24□□□□□ -0.13
ABCA2-218ENST00000487109 METTL24Q5JXM2 366 aa14.24□□□□□ -0.13
ABCA2-218ENST00000487109 ITSN2Q9NZM3 1697 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 YEATS4O95619 227 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
ABCA2-218ENST00000487109 POLR3GO15318 223 aaPredicted RBP14.23□□□□□ -0.13
ABCA2-218ENST00000487109 CHD1LQ86WJ1 897 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 SLU7O95391 586 aaKnown RBP14.23□□□□□ -0.13
ABCA2-218ENST00000487109 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 KIF1BPQ96EK5 621 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
ABCA2-218ENST00000487109 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
ABCA2-218ENST00000487109 MXRA7P84157 204 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 STXBP4Q6ZWJ1 553 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 MAATS1Q7Z4T9 603 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 CCDC160A6NGH7 325 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 PIP4K2BP78356 416 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 MAP3K9P80192 1104 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 LRSAM1Q6UWE0 723 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 SYNCQ9H7C4 482 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 TTC21BQ7Z4L5 1316 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 CDK13Q14004 1512 aaKnown RBP14.22□□□□□ -0.13
ABCA2-218ENST00000487109 PRC1O43663 620 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 FBF1Q8TES7 1133 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 MPHOSPH6Q99547 160 aaKnown RBP14.22□□□□□ -0.13
ABCA2-218ENST00000487109 RRP9O43818 475 aaKnown RBP14.22□□□□□ -0.13
ABCA2-218ENST00000487109 TMX1Q9H3N1 280 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 CALCOCO1Q9P1Z2 691 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 BCAR3O75815 825 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 OTUD6BQ8N6M0 293 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 CTCFLQ8NI51 663 aaPredicted RBP14.22□□□□□ -0.13
ABCA2-218ENST00000487109 IPO4Q8TEX9 1081 aaKnown RBP14.22□□□□□ -0.13
ABCA2-218ENST00000487109 NAPBQ9H115 298 aa14.22□□□□□ -0.13
ABCA2-218ENST00000487109 PSMC4P43686 418 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 SPTY2D1Q68D10 685 aaPredicted RBP14.21□□□□□ -0.13
ABCA2-218ENST00000487109 CGNQ9P2M7 1197 aaKnown RBP14.21□□□□□ -0.13
ABCA2-218ENST00000487109 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 NAP1L3Q99457 506 aaPredicted RBP14.21□□□□□ -0.13
ABCA2-218ENST00000487109 ODF2LQ9ULJ1 636 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 CALML4Q96GE6 196 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 SYCE3A1L190 88 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 MTIF2P46199 727 aaKnown RBP14.21□□□□□ -0.13
ABCA2-218ENST00000487109 CEP112Q8N8E3 955 aa14.21□□□□□ -0.13
ABCA2-218ENST00000487109 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
ABCA2-218ENST00000487109 TSR2Q969E8 191 aaKnown RBP14.21□□□□□ -0.13
ABCA2-218ENST00000487109 AMPD3Q01432 767 aa14.21□□□□□ -0.14
ABCA2-218ENST00000487109 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.14
ABCA2-218ENST00000487109 IQCA1Q86XH1 822 aa14.21□□□□□ -0.14
ABCA2-218ENST00000487109 HYPKQ9NX55 129 aa14.21□□□□□ -0.14
ABCA2-218ENST00000487109 HMGB1P09429 215 aaKnown RBP14.21□□□□□ -0.14
ABCA2-218ENST00000487109 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.14
ABCA2-218ENST00000487109 GLRX3O76003 335 aaKnown RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 SSRP1Q08945 709 aaKnown RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 SAMM50Q9Y512 469 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 TCERG1LQ5VWI1 586 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 SMARCC1Q92922 1105 aaPredicted RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC85AQ96PX6 553 aaPredicted RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 IQCGQ9H095 443 aaKnown RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 DENND4BO75064 1496 aaPredicted RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 PAIP2Q9BPZ3 127 aaKnown RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 IFI16Q16666 785 aaKnown RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 MAP7D1Q3KQU3 841 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 C8orf76Q96K31 380 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 CBX1P83916 185 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 CNNM3Q8NE01 707 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
ABCA2-218ENST00000487109 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
ABCA2-218ENST00000487109 NDC80O14777 642 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 TMPOP42166 694 aaKnown RBP14.19□□□□□ -0.14
ABCA2-218ENST00000487109 BICD1Q96G01 975 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 NLRP5P59047 1200 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 FAM114A1Q8IWE2 563 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 SLC12A7Q9Y666 1083 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 SH3BP5O60239 455 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 HSF2BPO75031 334 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC183Q5T5S1 534 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 CLIP2Q9UDT6 1046 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 PLEKHH1Q9ULM0 1364 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
ABCA2-218ENST00000487109 RANBP6O60518 1105 aaKnown RBP14.19□□□□□ -0.14
ABCA2-218ENST00000487109 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
ABCA2-218ENST00000487109 TTC12Q9H892 705 aaPredicted RBP14.19□□□□□ -0.14
ABCA2-218ENST00000487109 SLC5A1P13866 664 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC6Q16204 474 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 ANAPC4Q9UJX5 808 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC174Q6PII3 467 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CATIPQ7Z7H3 387 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 RNF41Q9H4P4 317 aaPredicted RBP14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms