RNA–Protein interactions for RNA: ENST00000486851.5

ELL3-205, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-205ENST00000486851 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.13
ELL3-205ENST00000486851 A0A087WZG4 1122 aa14.26□□□□□ -0.13
ELL3-205ENST00000486851 PER1O15534 1290 aaPredicted RBP14.26□□□□□ -0.13
ELL3-205ENST00000486851 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
ELL3-205ENST00000486851 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
ELL3-205ENST00000486851 STARD3NLO95772 234 aa14.25□□□□□ -0.13
ELL3-205ENST00000486851 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
ELL3-205ENST00000486851 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
ELL3-205ENST00000486851 A1BGP04217 495 aa14.24□□□□□ -0.13
ELL3-205ENST00000486851 HSPA8P11142 646 aaKnown RBP14.24□□□□□ -0.13
ELL3-205ENST00000486851 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
ELL3-205ENST00000486851 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
ELL3-205ENST00000486851 MASTLQ96GX5 879 aa14.24□□□□□ -0.13
ELL3-205ENST00000486851 CLSPNQ9HAW4 1339 aa14.23□□□□□ -0.13
ELL3-205ENST00000486851 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
ELL3-205ENST00000486851 TMEM88BA6NKF7 163 aa14.23□□□□□ -0.13
ELL3-205ENST00000486851 KCNQ3O43525 872 aa14.23□□□□□ -0.13
ELL3-205ENST00000486851 EIF4G2P78344 907 aaKnown RBP eCLIP14.23□□□□□ -0.13
ELL3-205ENST00000486851 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
ELL3-205ENST00000486851 FZD9O00144 591 aa14.22□□□□□ -0.13
ELL3-205ENST00000486851 SOGA3Q5TF21 947 aa14.22□□□□□ -0.13
ELL3-205ENST00000486851 LBX1P52954 281 aa14.21□□□□□ -0.13
ELL3-205ENST00000486851 SETDB2Q96T68 719 aa14.21□□□□□ -0.13
ELL3-205ENST00000486851 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
ELL3-205ENST00000486851 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
ELL3-205ENST00000486851 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
ELL3-205ENST00000486851 RGL2O15211 777 aa14.2□□□□□ -0.14
ELL3-205ENST00000486851 FKBP4Q02790 459 aaKnown RBP eCLIP14.2□□□□□ -0.14
ELL3-205ENST00000486851 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
ELL3-205ENST00000486851 CLEC4GQ6UXB4 293 aa14.2□□□□□ -0.14
ELL3-205ENST00000486851 ABHD8Q96I13 439 aa14.2□□□□□ -0.14
ELL3-205ENST00000486851 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
ELL3-205ENST00000486851 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
ELL3-205ENST00000486851 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
ELL3-205ENST00000486851 EPHX2P34913 555 aa14.19□□□□□ -0.14
ELL3-205ENST00000486851 RGS19P49795 217 aa14.19□□□□□ -0.14
ELL3-205ENST00000486851 TTC5Q8N0Z6 440 aa14.19□□□□□ -0.14
ELL3-205ENST00000486851 ZNF277Q9NRM2 450 aaPredicted RBP14.19□□□□□ -0.14
ELL3-205ENST00000486851 HACL1Q9UJ83 578 aa14.19□□□□□ -0.14
ELL3-205ENST00000486851 KIF7Q2M1P5 1343 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 NBPF26B4DH59 902 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 NPR1P16066 1061 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 PIP4K2AP48426 406 aaPredicted RBP14.18□□□□□ -0.14
ELL3-205ENST00000486851 NBPF10Q6P3W6 841 aaKnown RBP14.18□□□□□ -0.14
ELL3-205ENST00000486851 DZIP3Q86Y13 1208 aaKnown RBP14.18□□□□□ -0.14
ELL3-205ENST00000486851 NBPF15Q8N660 670 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 TRPM7Q96QT4 1865 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 NPC1L1Q9UHC9 1359 aa14.18□□□□□ -0.14
ELL3-205ENST00000486851 WDR33Q9C0J8 1336 aaKnown RBP14.17□□□□□ -0.14
ELL3-205ENST00000486851 ST5P78524 1137 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 CRY2Q49AN0 593 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 MAP1SQ66K74 1059 aaPredicted RBP14.17□□□□□ -0.14
ELL3-205ENST00000486851 SLC51AQ86UW1 340 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 CNTROBQ8N137 903 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 ABCC12Q96J65 1359 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 LAMB4A4D0S4 1761 aa14.17□□□□□ -0.14
ELL3-205ENST00000486851 FMR1Q06787 632 aaKnown RBP eCLIP14.16□□□□□ -0.14
ELL3-205ENST00000486851 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
ELL3-205ENST00000486851 RIC1Q4ADV7 1423 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 IARSP41252 1262 aaKnown RBP14.15□□□□□ -0.14
ELL3-205ENST00000486851 SCNN1DP51172 638 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 TEFQ10587 303 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 DEFB115Q30KQ5 88 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 PNMA8AQ86V59 439 aaPredicted RBP14.15□□□□□ -0.14
ELL3-205ENST00000486851 GPC2Q8N158 579 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 PSMD1Q99460 953 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 DDX21Q9NR30 783 aaKnown RBP eCLIP14.15□□□□□ -0.14
ELL3-205ENST00000486851 ZNF330Q9Y3S2 320 aaPredicted RBP14.15□□□□□ -0.14
ELL3-205ENST00000486851 NUP98P52948 1817 aa14.15□□□□□ -0.14
ELL3-205ENST00000486851 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
ELL3-205ENST00000486851 CST9Q5W186 159 aa14.14□□□□□ -0.15
ELL3-205ENST00000486851 NBPF5PQ86XG9 351 aaPredicted RBP14.14□□□□□ -0.15
ELL3-205ENST00000486851 AIDAQ96BJ3 306 aa14.14□□□□□ -0.15
ELL3-205ENST00000486851 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
ELL3-205ENST00000486851 MAP2K1Q02750 393 aaPredicted RBP14.13□□□□□ -0.15
ELL3-205ENST00000486851 HLFQ16534 295 aa14.13□□□□□ -0.15
ELL3-205ENST00000486851 RTKN2Q8IZC4 609 aa14.13□□□□□ -0.15
ELL3-205ENST00000486851 SYNE4Q8N205 404 aa14.13□□□□□ -0.15
ELL3-205ENST00000486851 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
ELL3-205ENST00000486851 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
ELL3-205ENST00000486851 HOXA10P31260 410 aaPredicted RBP14.11□□□□□ -0.15
ELL3-205ENST00000486851 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
ELL3-205ENST00000486851 IBTKQ9P2D0 1353 aaPredicted RBP14.1□□□□□ -0.15
ELL3-205ENST00000486851 SNRPA1P09661 255 aaKnown RBP14.1□□□□□ -0.15
ELL3-205ENST00000486851 EPS15P42566 896 aa14.1□□□□□ -0.15
ELL3-205ENST00000486851 TPTE2Q6XPS3 522 aa14.1□□□□□ -0.15
ELL3-205ENST00000486851 CAPNS2Q96L46 248 aa14.1□□□□□ -0.15
ELL3-205ENST00000486851 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
ELL3-205ENST00000486851 PDE4DIPQ5VU43 2346 aa14.09□□□□□ -0.15
ELL3-205ENST00000486851 TRAF5O00463 557 aa14.09□□□□□ -0.15
ELL3-205ENST00000486851 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
ELL3-205ENST00000486851 ZNF652Q9Y2D9 606 aa14.09□□□□□ -0.15
ELL3-205ENST00000486851 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
ELL3-205ENST00000486851 UBN2Q6ZU65 1347 aa14.09□□□□□ -0.15
ELL3-205ENST00000486851 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms