RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 RLBP1P12271 317 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
MCF2L-227ENST00000486806 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
MCF2L-227ENST00000486806 PI4KAP1Q8N8J0 262 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-227ENST00000486806 N4BP2Q86UW6 1770 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-227ENST00000486806 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-227ENST00000486806 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 A0A087WZG4 1122 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
MCF2L-227ENST00000486806 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 F6X3S4 739 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 SLC15A2Q16348 729 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 C20orf194Q5TEA3 1177 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 KIF6Q6ZMV9 814 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
MCF2L-227ENST00000486806 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
MCF2L-227ENST00000486806 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
MCF2L-227ENST00000486806 PHF14O94880 888 aa12.17□□□□□ -0.46
MCF2L-227ENST00000486806 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
MCF2L-227ENST00000486806 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
MCF2L-227ENST00000486806 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
MCF2L-227ENST00000486806 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
MCF2L-227ENST00000486806 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
MCF2L-227ENST00000486806 MAP3K2Q9Y2U5 619 aa12.17□□□□□ -0.46
MCF2L-227ENST00000486806 MS4A1P11836 297 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 TRAPPC3LQ5T215 181 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
MCF2L-227ENST00000486806 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
MCF2L-227ENST00000486806 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
MCF2L-227ENST00000486806 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
MCF2L-227ENST00000486806 TMEM57Q8N5G2 664 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-227ENST00000486806 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 NARFQ9UHQ1 456 aa12.16□□□□□ -0.46
MCF2L-227ENST00000486806 IGKV5-2P06315 115 aa12.15□□□□□ -0.46
MCF2L-227ENST00000486806 HLFQ16534 295 aa12.15□□□□□ -0.46
MCF2L-227ENST00000486806 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
MCF2L-227ENST00000486806 SRP68Q9UHB9 627 aaKnown RBP12.15□□□□□ -0.46
MCF2L-227ENST00000486806 RFC4P35249 363 aa12.14□□□□□ -0.47
MCF2L-227ENST00000486806 CCT4P50991 539 aaKnown RBP12.14□□□□□ -0.47
MCF2L-227ENST00000486806 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
MCF2L-227ENST00000486806 USPL1Q5W0Q7 1092 aa12.14□□□□□ -0.47
MCF2L-227ENST00000486806 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
MCF2L-227ENST00000486806 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
MCF2L-227ENST00000486806 COL23A1Q86Y22 540 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-227ENST00000486806 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
MCF2L-227ENST00000486806 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
MCF2L-227ENST00000486806 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 GYS1P13807 737 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 TRIM28Q13263 835 aaKnown RBP12.13□□□□□ -0.47
MCF2L-227ENST00000486806 TCIRG1Q13488 830 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 MYD88Q99836 296 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 SRCIN1Q9C0H9 1055 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 COL24A1Q17RW2 1714 aa12.13□□□□□ -0.47
MCF2L-227ENST00000486806 UBN2Q6ZU65 1347 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 ZPR1O75312 459 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 ALDH1L1O75891 902 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 CWF19L2Q2TBE0 894 aaKnown RBP12.12□□□□□ -0.47
MCF2L-227ENST00000486806 ITPRIPQ8IWB1 547 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 ARXQ96QS3 562 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
MCF2L-227ENST00000486806 ATP5J2-PTCD1G3V325 749 aa12.11□□□□□ -0.47
MCF2L-227ENST00000486806 FKBP8Q14318 412 aa12.11□□□□□ -0.47
MCF2L-227ENST00000486806 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
MCF2L-227ENST00000486806 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
MCF2L-227ENST00000486806 UTYO14607 1347 aa12.11□□□□□ -0.47
MCF2L-227ENST00000486806 NUP98P52948 1817 aa12.1□□□□□ -0.47
MCF2L-227ENST00000486806 IRX6P78412 446 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-227ENST00000486806 GCKRQ14397 625 aa12.1□□□□□ -0.47
MCF2L-227ENST00000486806 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
MCF2L-227ENST00000486806 NLRP10Q86W26 655 aa12.1□□□□□ -0.47
MCF2L-227ENST00000486806 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
MCF2L-227ENST00000486806 CARMIL3Q8ND23 1372 aa12.09□□□□□ -0.47
MCF2L-227ENST00000486806 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-227ENST00000486806 GPTP24298 496 aa12.09□□□□□ -0.47
MCF2L-227ENST00000486806 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
MCF2L-227ENST00000486806 MEIS3Q99687 375 aa12.09□□□□□ -0.47
MCF2L-227ENST00000486806 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-227ENST00000486806 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
MCF2L-227ENST00000486806 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-227ENST00000486806 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
MCF2L-227ENST00000486806 GRM8O00222 908 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms