RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 ESYT1Q9BSJ8 1104 aa14.67□□□□□ -0.06
SHROOM3-208ENST00000486758 CCDC186Q7Z3E2 898 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 KLHDC4Q8TBB5 520 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 MAP3K2Q9Y2U5 619 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 STX6O43752 255 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 TNNT1P13805 278 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 TAF7LQ5H9L4 462 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 PAXIP1Q6ZW49 1069 aaPredicted RBP14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 PIBF1Q8WXW3 757 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
SHROOM3-208ENST00000486758 ZNF853P0CG23 659 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 TERF1P54274 439 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 DIP2CQ9Y2E4 1556 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 H3BQV1 296 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 SOCS7O14512 581 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 HOXC9P31274 260 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 CHRNA2Q15822 529 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 IFFO2Q5TF58 517 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 IL17REQ8NFR9 667 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 RTL1A6NKG5 1358 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 NCOA3Q9Y6Q9 1424 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 LUZP1Q86V48 1076 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 RUFY2Q8WXA3 655 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 IL25Q9H293 177 aa14.65□□□□□ -0.06
SHROOM3-208ENST00000486758 ATP5J2-PTCD1G3V325 749 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 PTCD1O75127 700 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 CABLES1Q8TDN4 633 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 PDLIM2Q96JY6 352 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 FAM135BQ49AJ0 1406 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 ADGRB1O14514 1584 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 PYCARDQ9ULZ3 195 aa14.64□□□□□ -0.07
SHROOM3-208ENST00000486758 DDX58O95786 925 aaKnown RBP14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 BRD1O95696 1058 aa14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 GJB2P29033 226 aa14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 CCAR2Q8N163 923 aaKnown RBP14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 KIF1BPQ96EK5 621 aa14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 FLT4P35916 1363 aa14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 ATP8B2P98198 1209 aa14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 DDX17Q92841 729 aaKnown RBP14.63□□□□□ -0.07
SHROOM3-208ENST00000486758 TNNT3P45378 269 aaPredicted RBP14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 LRMPQ12912 555 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 RIMS1Q86UR5 1692 aaKnown RBP14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 CHMLP26374 656 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 NBPF6Q5VWK0 638 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 NBPF4Q96M43 638 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 HOMER1Q86YM7 354 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
SHROOM3-208ENST00000486758 LETM1O95202 739 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 ZSCAN22P10073 491 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 SYT1P21579 422 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 UBE2HP62256 183 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 ILDR2Q71H61 639 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 PRDM4Q9UKN5 801 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 MAP3K11Q16584 847 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 MYD88Q99836 296 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 PRAMEF22A3QJZ6 481 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 NAA30Q147X3 362 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 HSP90AB4PQ58FF6 505 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 PDRG1Q9NUG6 133 aa14.61□□□□□ -0.07
SHROOM3-208ENST00000486758 AK2P54819 239 aa14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 KRT85P78386 507 aa14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 GNL2Q13823 731 aaKnown RBP14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 FAM177A1Q8N128 213 aaPredicted RBP14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 STRN4Q9NRL3 753 aa14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 LRRC2Q9BYS8 371 aa14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 USP44Q9H0E7 712 aa14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
SHROOM3-208ENST00000486758 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 SPATA32Q96LK8 384 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 CYP46A1Q9Y6A2 500 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 PIK3R4Q99570 1358 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 DMTNQ08495 405 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 NEXMIFQ5QGS0 1516 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 ALKQ9UM73 1620 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 CLIP2Q9UDT6 1046 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
SHROOM3-208ENST00000486758 ANO6Q4KMQ2 910 aa14.58□□□□□ -0.07
SHROOM3-208ENST00000486758 ANKRD24Q8TF21 1146 aa14.58□□□□□ -0.07
SHROOM3-208ENST00000486758 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
SHROOM3-208ENST00000486758 DACT1Q9NYF0 836 aa14.58□□□□□ -0.08
SHROOM3-208ENST00000486758 RAB11FIP3O75154 756 aa14.58□□□□□ -0.08
SHROOM3-208ENST00000486758 F13A1P00488 732 aa14.58□□□□□ -0.08
SHROOM3-208ENST00000486758 PNPLA6Q8IY17 1366 aa14.58□□□□□ -0.08
SHROOM3-208ENST00000486758 NRDCO43847 1150 aa14.57□□□□□ -0.08
SHROOM3-208ENST00000486758 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
SHROOM3-208ENST00000486758 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
SHROOM3-208ENST00000486758 TOMM22Q9NS69 142 aa14.57□□□□□ -0.08
SHROOM3-208ENST00000486758 CYP2E1P05181 493 aaPredicted RBP14.57□□□□□ -0.08
SHROOM3-208ENST00000486758 COL9A3Q14050 684 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms