RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
COL12A1-208ENST00000486533 PARP3Q9Y6F1 533 aa11.58□□□□□ -0.56
COL12A1-208ENST00000486533 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
COL12A1-208ENST00000486533 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
COL12A1-208ENST00000486533 CYP19A1P11511 503 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-208ENST00000486533 IL17REQ8NFR9 667 aa11.56□□□□□ -0.56
COL12A1-208ENST00000486533 PHACTR3Q96KR7 559 aa11.56□□□□□ -0.56
COL12A1-208ENST00000486533 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
COL12A1-208ENST00000486533 KIF13BQ9NQT8 1826 aa11.56□□□□□ -0.56
COL12A1-208ENST00000486533 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-208ENST00000486533 C10orf71Q711Q0 1435 aa11.55□□□□□ -0.56
COL12A1-208ENST00000486533 ZPR1O75312 459 aa11.55□□□□□ -0.56
COL12A1-208ENST00000486533 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
COL12A1-208ENST00000486533 ZBTB1Q9Y2K1 713 aa11.55□□□□□ -0.56
COL12A1-208ENST00000486533 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
COL12A1-208ENST00000486533 SIPA1L3O60292 1781 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-208ENST00000486533 PXDNLA1KZ92 1463 aa11.55□□□□□ -0.56
COL12A1-208ENST00000486533 SOS1Q07889 1333 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-208ENST00000486533 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 EXOC6Q8TAG9 804 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 COL15A1P39059 1388 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 FCHSD2O94868 740 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 STARD3NLO95772 234 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
COL12A1-208ENST00000486533 TGFB2P61812 414 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
COL12A1-208ENST00000486533 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
COL12A1-208ENST00000486533 ZNF496Q96IT1 587 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-208ENST00000486533 KIAA1551Q9HCM1 1747 aa11.53□□□□□ -0.56
COL12A1-208ENST00000486533 CEMIPQ8WUJ3 1361 aa11.53□□□□□ -0.56
COL12A1-208ENST00000486533 A0A0G2JLW4 131 aa11.53□□□□□ -0.56
COL12A1-208ENST00000486533 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
COL12A1-208ENST00000486533 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
COL12A1-208ENST00000486533 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.56
COL12A1-208ENST00000486533 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
COL12A1-208ENST00000486533 DDR1Q08345 913 aa11.52□□□□□ -0.57
COL12A1-208ENST00000486533 CENPQQ7L2Z9 268 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-208ENST00000486533 FMNL2Q96PY5 1086 aa11.52□□□□□ -0.57
COL12A1-208ENST00000486533 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
COL12A1-208ENST00000486533 ZNF330Q9Y3S2 320 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-208ENST00000486533 NEFMP07197 916 aa11.51□□□□□ -0.57
COL12A1-208ENST00000486533 DPEP1P16444 411 aa11.51□□□□□ -0.57
COL12A1-208ENST00000486533 MCM10Q7L590 875 aa11.51□□□□□ -0.57
COL12A1-208ENST00000486533 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
COL12A1-208ENST00000486533 NARFQ9UHQ1 456 aa11.51□□□□□ -0.57
COL12A1-208ENST00000486533 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
COL12A1-208ENST00000486533 POLRMTO00411 1230 aaKnown RBP11.5□□□□□ -0.57
COL12A1-208ENST00000486533 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-208ENST00000486533 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-208ENST00000486533 KCNQ3O43525 872 aa11.5□□□□□ -0.57
COL12A1-208ENST00000486533 PDE4AP27815 886 aa11.5□□□□□ -0.57
COL12A1-208ENST00000486533 TM4SF1P30408 202 aa11.5□□□□□ -0.57
COL12A1-208ENST00000486533 DCTN1Q14203 1278 aa11.5□□□□□ -0.57
COL12A1-208ENST00000486533 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
COL12A1-208ENST00000486533 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
COL12A1-208ENST00000486533 EIF5P55010 431 aaKnown RBP11.49□□□□□ -0.57
COL12A1-208ENST00000486533 NFIXQ14938 502 aa11.49□□□□□ -0.57
COL12A1-208ENST00000486533 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
COL12A1-208ENST00000486533 ZNF526Q8TF50 670 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-208ENST00000486533 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
COL12A1-208ENST00000486533 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-208ENST00000486533 AFDNP55196 1824 aaKnown RBP11.49□□□□□ -0.57
COL12A1-208ENST00000486533 A0A087WZG4 1122 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 E9PSI1 815 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 A1BGP04217 495 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 C1QTNF8P60827 252 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 AAMPQ13685 434 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 BICDL1Q6ZP65 573 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 BCL11AQ9H165 835 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-208ENST00000486533 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 ADAMTS8Q9UP79 889 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 ADCY9O60503 1353 aa11.48□□□□□ -0.57
COL12A1-208ENST00000486533 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 HTATSF1O43719 755 aaKnown RBP11.47□□□□□ -0.57
COL12A1-208ENST00000486533 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 KCNA3P22001 575 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 CHRNA5P30532 468 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 IL6STP40189 918 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-208ENST00000486533 CRBNQ96SW2 442 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 TBC1D2BQ9UPU7 963 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 SCN7AQ01118 1682 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
COL12A1-208ENST00000486533 CEP350Q5VT06 3117 aa11.46□□□□□ -0.57
COL12A1-208ENST00000486533 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.57
COL12A1-208ENST00000486533 POTEFA5A3E0 1075 aa11.46□□□□□ -0.57
COL12A1-208ENST00000486533 SERPINB2P05120 415 aa11.46□□□□□ -0.57
COL12A1-208ENST00000486533 DALRD3Q5D0E6 543 aaKnown RBP11.46□□□□□ -0.57
COL12A1-208ENST00000486533 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.58
COL12A1-208ENST00000486533 PRAMEF22A3QJZ6 481 aa11.45□□□□□ -0.58
COL12A1-208ENST00000486533 SNRPA1P09661 255 aaKnown RBP11.45□□□□□ -0.58
COL12A1-208ENST00000486533 PIP4K2AP48426 406 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-208ENST00000486533 CDCA7LQ96GN5 454 aa11.45□□□□□ -0.58
COL12A1-208ENST00000486533 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
COL12A1-208ENST00000486533 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-208ENST00000486533 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms