RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 LBX1P52954 281 aa16.94■□□□□ 0.3
SSR4-211ENST00000486204 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
SSR4-211ENST00000486204 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
SSR4-211ENST00000486204 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
SSR4-211ENST00000486204 MIER1Q8N108 512 aa16.93■□□□□ 0.3
SSR4-211ENST00000486204 MIS18AQ9NYP9 233 aa16.93■□□□□ 0.3
SSR4-211ENST00000486204 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
SSR4-211ENST00000486204 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
SSR4-211ENST00000486204 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
SSR4-211ENST00000486204 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
SSR4-211ENST00000486204 VEGFBP49765 207 aa16.91■□□□□ 0.3
SSR4-211ENST00000486204 MLLT1Q03111 559 aaPredicted RBP16.91■□□□□ 0.3
SSR4-211ENST00000486204 NFKBIEO00221 500 aa16.9■□□□□ 0.3
SSR4-211ENST00000486204 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
SSR4-211ENST00000486204 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
SSR4-211ENST00000486204 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
SSR4-211ENST00000486204 ZPR1O75312 459 aa16.89■□□□□ 0.29
SSR4-211ENST00000486204 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
SSR4-211ENST00000486204 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SSR4-211ENST00000486204 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
SSR4-211ENST00000486204 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
SSR4-211ENST00000486204 BABAM1Q9NWV8 329 aa16.89■□□□□ 0.29
SSR4-211ENST00000486204 CHL1O00533 1208 aa16.88■□□□□ 0.29
SSR4-211ENST00000486204 EIF4A1P60842 406 aaKnown RBP16.88■□□□□ 0.29
SSR4-211ENST00000486204 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
SSR4-211ENST00000486204 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
SSR4-211ENST00000486204 NUP98P52948 1817 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
SSR4-211ENST00000486204 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 PASKQ96RG2 1323 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
SSR4-211ENST00000486204 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 TMEM88BA6NKF7 163 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 H0YIN7 160 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
SSR4-211ENST00000486204 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
SSR4-211ENST00000486204 RGS19P49795 217 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
SSR4-211ENST00000486204 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
SSR4-211ENST00000486204 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
SSR4-211ENST00000486204 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
SSR4-211ENST00000486204 NFIXQ14938 502 aa16.85■□□□□ 0.29
SSR4-211ENST00000486204 COL15A1P39059 1388 aa16.85■□□□□ 0.29
SSR4-211ENST00000486204 SERPINB2P05120 415 aa16.84■□□□□ 0.29
SSR4-211ENST00000486204 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
SSR4-211ENST00000486204 ANKRD36CQ5JPF3 1778 aa16.84■□□□□ 0.29
SSR4-211ENST00000486204 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
SSR4-211ENST00000486204 STARD3NLO95772 234 aa16.83■□□□□ 0.28
SSR4-211ENST00000486204 MBIPQ9NS73 344 aa16.83■□□□□ 0.28
SSR4-211ENST00000486204 IFT57Q9NWB7 429 aa16.83■□□□□ 0.28
SSR4-211ENST00000486204 NRXN2Q9P2S2 1712 aa16.83■□□□□ 0.28
SSR4-211ENST00000486204 ZNF521Q96K83 1311 aa16.82■□□□□ 0.28
SSR4-211ENST00000486204 A1BGP04217 495 aa16.82■□□□□ 0.28
SSR4-211ENST00000486204 CALD1Q05682 793 aaKnown RBP16.82■□□□□ 0.28
SSR4-211ENST00000486204 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
SSR4-211ENST00000486204 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
SSR4-211ENST00000486204 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
SSR4-211ENST00000486204 IQCA1LA6NCM1 817 aa16.81■□□□□ 0.28
SSR4-211ENST00000486204 C21orf2O43822 256 aa16.81■□□□□ 0.28
SSR4-211ENST00000486204 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
SSR4-211ENST00000486204 CANXP27824 592 aaKnown RBP16.81■□□□□ 0.28
SSR4-211ENST00000486204 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
SSR4-211ENST00000486204 GNAI1P63096 354 aa16.81■□□□□ 0.28
SSR4-211ENST00000486204 MAP2K1Q02750 393 aaPredicted RBP16.81■□□□□ 0.28
SSR4-211ENST00000486204 DEFB115Q30KQ5 88 aa16.81■□□□□ 0.28
SSR4-211ENST00000486204 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSR4-211ENST00000486204 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
SSR4-211ENST00000486204 IL16Q14005 1332 aa16.8■□□□□ 0.28
SSR4-211ENST00000486204 NBPF26B4DH59 902 aa16.8■□□□□ 0.28
SSR4-211ENST00000486204 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
SSR4-211ENST00000486204 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
SSR4-211ENST00000486204 NBPF15Q8N660 670 aa16.8■□□□□ 0.28
SSR4-211ENST00000486204 SALL2Q9Y467 1007 aaPredicted RBP16.8■□□□□ 0.28
SSR4-211ENST00000486204 RASSF10A6NK89 507 aa16.79■□□□□ 0.28
SSR4-211ENST00000486204 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
SSR4-211ENST00000486204 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
SSR4-211ENST00000486204 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
SSR4-211ENST00000486204 TAF1DQ9H5J8 278 aaPredicted RBP16.79■□□□□ 0.28
SSR4-211ENST00000486204 ARFGEF2Q9Y6D5 1785 aa16.79■□□□□ 0.28
SSR4-211ENST00000486204 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
SSR4-211ENST00000486204 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
SSR4-211ENST00000486204 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
SSR4-211ENST00000486204 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
SSR4-211ENST00000486204 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
SSR4-211ENST00000486204 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
SSR4-211ENST00000486204 TSR2Q969E8 191 aaKnown RBP16.77■□□□□ 0.28
SSR4-211ENST00000486204 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
SSR4-211ENST00000486204 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
SSR4-211ENST00000486204 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
SSR4-211ENST00000486204 ERBB4Q15303 1308 aa16.76■□□□□ 0.27
SSR4-211ENST00000486204 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
SSR4-211ENST00000486204 HOXB7P09629 217 aa16.76■□□□□ 0.27
SSR4-211ENST00000486204 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
SSR4-211ENST00000486204 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 415.6 ms