RNA–Protein interactions for RNA: ENST00000486043.1

UPB1-204, Transcript of beta-ureidopropionase 1, humanhuman

TSL 3

Gene UPB1, Length 420 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1-204ENST00000486043 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
UPB1-204ENST00000486043 SCN7AQ01118 1682 aa13.15□□□□□ -0.3
UPB1-204ENST00000486043 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
UPB1-204ENST00000486043 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
UPB1-204ENST00000486043 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
UPB1-204ENST00000486043 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
UPB1-204ENST00000486043 MASTLQ96GX5 879 aa13.15□□□□□ -0.3
UPB1-204ENST00000486043 PASKQ96RG2 1323 aa13.14□□□□□ -0.31
UPB1-204ENST00000486043 ANKRD31Q8N7Z5 1873 aa13.14□□□□□ -0.31
UPB1-204ENST00000486043 COL11A2P13942 1736 aaPredicted RBP13.14□□□□□ -0.31
UPB1-204ENST00000486043 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
UPB1-204ENST00000486043 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
UPB1-204ENST00000486043 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
UPB1-204ENST00000486043 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
UPB1-204ENST00000486043 ST5P78524 1137 aa13.13□□□□□ -0.31
UPB1-204ENST00000486043 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
UPB1-204ENST00000486043 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
UPB1-204ENST00000486043 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
UPB1-204ENST00000486043 ITGBL1O95965 494 aaPredicted RBP13.12□□□□□ -0.31
UPB1-204ENST00000486043 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
UPB1-204ENST00000486043 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
UPB1-204ENST00000486043 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
UPB1-204ENST00000486043 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
UPB1-204ENST00000486043 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
UPB1-204ENST00000486043 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
UPB1-204ENST00000486043 CNTNAP1P78357 1384 aa13.11□□□□□ -0.31
UPB1-204ENST00000486043 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
UPB1-204ENST00000486043 DLG5Q8TDM6 1919 aa13.11□□□□□ -0.31
UPB1-204ENST00000486043 ZNF541Q9H0D2 1346 aa13.11□□□□□ -0.31
UPB1-204ENST00000486043 FOXN1O15353 648 aa13.1□□□□□ -0.31
UPB1-204ENST00000486043 NPR1P16066 1061 aa13.1□□□□□ -0.31
UPB1-204ENST00000486043 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
UPB1-204ENST00000486043 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
UPB1-204ENST00000486043 MCM10Q7L590 875 aa13.1□□□□□ -0.31
UPB1-204ENST00000486043 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
UPB1-204ENST00000486043 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
UPB1-204ENST00000486043 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
UPB1-204ENST00000486043 IQCA1LA6NCM1 817 aa13.09□□□□□ -0.31
UPB1-204ENST00000486043 NPHP1O15259 732 aa13.09□□□□□ -0.31
UPB1-204ENST00000486043 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
UPB1-204ENST00000486043 FER1L6Q2WGJ9 1857 aa13.09□□□□□ -0.31
UPB1-204ENST00000486043 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
UPB1-204ENST00000486043 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
UPB1-204ENST00000486043 FZD9O00144 591 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 RGL2O15211 777 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 VEGFBP49765 207 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 DCTN1Q14203 1278 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 HLFQ16534 295 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
UPB1-204ENST00000486043 TMEM88BA6NKF7 163 aa13.07□□□□□ -0.32
UPB1-204ENST00000486043 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
UPB1-204ENST00000486043 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
UPB1-204ENST00000486043 PRDM10Q9NQV6 1147 aa13.06□□□□□ -0.32
UPB1-204ENST00000486043 WBP1LQ9NX94 342 aa13.06□□□□□ -0.32
UPB1-204ENST00000486043 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
UPB1-204ENST00000486043 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
UPB1-204ENST00000486043 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
UPB1-204ENST00000486043 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
UPB1-204ENST00000486043 EPHX2P34913 555 aa13.05□□□□□ -0.32
UPB1-204ENST00000486043 IARSP41252 1262 aaKnown RBP13.05□□□□□ -0.32
UPB1-204ENST00000486043 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
UPB1-204ENST00000486043 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
UPB1-204ENST00000486043 SLC51AQ86UW1 340 aa13.05□□□□□ -0.32
UPB1-204ENST00000486043 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
UPB1-204ENST00000486043 RNF123Q5XPI4 1314 aa13.05□□□□□ -0.32
UPB1-204ENST00000486043 ZNF316A6NFI3 1004 aaPredicted RBP13.04□□□□□ -0.32
UPB1-204ENST00000486043 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
UPB1-204ENST00000486043 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
UPB1-204ENST00000486043 U2AF1L5P0DN76 240 aaPredicted RBP13.04□□□□□ -0.32
UPB1-204ENST00000486043 U2AF1Q01081 240 aaKnown RBP eCLIP13.04□□□□□ -0.32
UPB1-204ENST00000486043 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
UPB1-204ENST00000486043 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
UPB1-204ENST00000486043 PSMD1Q99460 953 aa13.04□□□□□ -0.32
UPB1-204ENST00000486043 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
UPB1-204ENST00000486043 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
UPB1-204ENST00000486043 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
UPB1-204ENST00000486043 COL4A5P29400 1685 aa13.03□□□□□ -0.32
UPB1-204ENST00000486043 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
UPB1-204ENST00000486043 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
UPB1-204ENST00000486043 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
UPB1-204ENST00000486043 CNTROBQ8N137 903 aa13.03□□□□□ -0.32
UPB1-204ENST00000486043 GPC2Q8N158 579 aa13.03□□□□□ -0.32
UPB1-204ENST00000486043 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
UPB1-204ENST00000486043 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
UPB1-204ENST00000486043 DICER1Q9UPY3 1922 aaKnown RBP13.02□□□□□ -0.32
UPB1-204ENST00000486043 HOXA10P31260 410 aaPredicted RBP13.02□□□□□ -0.33
UPB1-204ENST00000486043 CTCFP49711 727 aaPredicted RBP13.02□□□□□ -0.33
UPB1-204ENST00000486043 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
UPB1-204ENST00000486043 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
UPB1-204ENST00000486043 ARFGEF2Q9Y6D5 1785 aa13.02□□□□□ -0.33
UPB1-204ENST00000486043 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
UPB1-204ENST00000486043 LBX1P52954 281 aa13.01□□□□□ -0.33
UPB1-204ENST00000486043 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
UPB1-204ENST00000486043 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
UPB1-204ENST00000486043 UBN2Q6ZU65 1347 aa13.01□□□□□ -0.33
UPB1-204ENST00000486043 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
UPB1-204ENST00000486043 SCNN1DP51172 638 aa13□□□□□ -0.33
UPB1-204ENST00000486043 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms