RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 ANO10Q9NW15 660 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 IDEP14735 1019 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 USP8P40818 1118 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC152Q4G0S7 254 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC113Q9H0I3 377 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 GBP3Q9H0R5 595 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 MAP2K1Q02750 393 aaPredicted RBP12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 LRRC27Q9C0I9 530 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 BICD1Q96G01 975 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC102AQ96A19 550 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC40Q4G0X9 1142 aa12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 NME9Q86XW9 330 aa12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 LRRC45Q96CN5 670 aa12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 PUF60Q9UHX1 559 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 ZGPATQ8N5A5 531 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 PYM1Q9BRP8 204 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-207ENST00000485983 ZSCAN12O43309 604 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 PRC1O43663 620 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 UQCRFS1P1P0C7P4 283 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 PSMD1Q99460 953 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 STX6O43752 255 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 PAFAH1B1P43034 410 aa12.21□□□□□ -0.46
SRGAP3-207ENST00000485983 WASLO00401 505 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 ACTN2P35609 894 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 UBA7P41226 1012 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 ALDH1L2Q3SY69 923 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 GOLGA6L10A0A0M3HER8 536 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 KIF5CO60282 957 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 USP37Q86T82 979 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 CNNM3Q8NE01 707 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 ERMNQ8TAM6 284 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 MSH6P52701 1360 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 IARSP41252 1262 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 IFFO1Q0D2I5 559 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 MPNDQ8N594 471 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 UBXN4Q92575 508 aa12.2□□□□□ -0.46
SRGAP3-207ENST00000485983 ABCC11Q96J66 1382 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 GCOM1H8Y6P7 765 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 YEATS4O95619 227 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 MYZAPP0CAP1 466 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 LRSAM1Q6UWE0 723 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 NLRP3Q96P20 1036 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 SNRPA1P09661 255 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 GUCY1B3Q02153 619 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 JDP2Q8WYK2 163 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 KIF2AO00139 706 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 TOP1P11387 765 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
SRGAP3-207ENST00000485983 CAMK4Q16566 473 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 GOLIM4O00461 696 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 MAP9Q49MG5 647 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 SMARCA5O60264 1052 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 TNNT1P13805 278 aa12.18□□□□□ -0.46
SRGAP3-207ENST00000485983 ATP5J2-PTCD1G3V325 749 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 CTAGE5O15320 804 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 MCM3P25205 808 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 ZNF354CQ86Y25 554 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 ANKRD24Q8TF21 1146 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 F6X3S4 739 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 CCDC172P0C7W6 258 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 FERP16591 822 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 SMC1AQ14683 1233 aaKnown RBP12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 SYNCQ9H7C4 482 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 NAIPQ13075 1403 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
SRGAP3-207ENST00000485983 LMAN1P49257 510 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms